Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O88451 | Rdh7 | Retinol dehydrogenase 7 (EC 1.1.1.105) … | Mus musculus (Mouse) | 316 aa |
Protein Details: O88451 (Rdh7)
Protein Information
| Accession | O88451 |
|---|---|
| Protein Names | Retinol dehydrogenase 7 (EC 1.1.1.105) (Cis-retinol/3alpha-hydroxysterol short-chain dehydrogenase isozyme 2) (Cis-retinol/androgen dehydrogenase type 2) (CRAD-2) |
| Gene Symbol | Rdh7 |
| Organism | Mus musculus (Mouse) |
| Length | 316 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MWLYLVALVG11LWTLLRFFRE21RQVVSHLQDK31YVFITGCDSG41FGNLLARQLD
51-10051RRGMRVLAAC61LTEKGAEQLR71NKTSDRLETV81ILDVTKTESI91VAATQWVKER
101-150101VGNRGLWGLV111NNAGICVFAI121NEWLKKEDFA131NILDVNLLGM141IEVTLSMLPL
151-200151VRKARGRVVN161ISSSMGRVSL171CGGGYCISKY181GVEAFSDSLR191REISYFGVKV
201-250201AIIEPGGFRT211NVSNYERLSH221SIEKLWDQTS231SEVKEVYDKN241FLDSYIKAIQ
251-300251SLTDTCSDDL261SVVTDCMEHA271LTACHPRTRY281SAGWDAKLFY291LPLSYMPTFL
301-316301VDAMLYWSSV311KPAQAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 37 | SWISSPALM DBPTM CYSMODDB | NAD(P)-binding domain superfamily SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Liver
(28526873)
|
Liver
(34884899)
|
GPS-Palm: 0.91
Deep-Palm: 0.95
|
| 60 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 116 | - | - | - |
Deep-Palm: 0.92
|
|
| 171 | SWISSPALM DBPTM CYSMODDB | short chain dehydrogenase |
Liver
(28526873)
| - |
Deep-Palm: 0.94
|
| 176 | SWISSPALM DBPTM CYSMODDB | short chain dehydrogenase |
Liver
(28526873)
| - |
Deep-Palm: 0.93
|
| 256 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.33
|
| 266 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.46
|
| 274 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.66
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Liver
Specificity: 1.000
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.