Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O88685 | Psmc3 | 26S proteasome regulatory subunit 6A … | Mus musculus (Mouse) | 442 aa |
Protein Details: O88685 (Psmc3)
Protein Information
| Accession | O88685 |
|---|---|
| Protein Names | 26S proteasome regulatory subunit 6A (26S proteasome AAA-ATPase subunit RPT5) (Proteasome 26S subunit ATPase 3) (Tat-binding protein 1) (TBP-1) |
| Gene Symbol | Psmc3 |
| Organism | Mus musculus (Mouse) |
| Length | 442 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQEMNLLPTP11ESPVTRQEKM21ATVWDEAEQD31GIGEEVLKMS41TEEIVQRTRL
51-10051LDSEIKIMKS61EVLRVTHELQ71AMKDKIKENS81EKIKVNKTLP91YLVSNVIELL
101-150101DVDPNDQEED111GANIDLDSQR121KGKCAVIKTS131TRQTYFLPVI141GLVDAEKLKP
151-200151GDLVGVNKDS161YLILETLPTE171YDSRVKAMEV181DERPTEQYSD191IGGLDKQIQE
201-250201LVEAIVLPMN211HKEKFENLGI221QPPKGVLMYG231PPGTGKTLLA241RACAAQTKAT
251-300251FLKLAGPQLV261QMFIGDGAKL271VRDAFALAKE281KAPSIIFIDE291LDAIGTKRFD
301-350301SEKAGDREVQ311RTMLELLNQL321DGFQPNTQVK331VIAATNRVDI341LDPALLRSGR
351-400351LDRKIEFPMP361NEEARARIMQ371IHSRKMNVSP381DVNYEELARC391TDDFNGAQCK
401-442401AVCVEAGMIA411LRRGATELTH421EDYMEGILEV431QAKKKANLQY441YA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 124 | - | - | - |
Deep-Palm: 0.76
|
|
| 243 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 390 | - | - | - |
Deep-Palm: 0.71
|
|
| 399 | - | - | - |
Deep-Palm: 0.94
|
|
| 403 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.