Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O88703 | Hcn2 | Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel … | Mus musculus (Mouse) | 863 aa |
Protein Details: O88703 (Hcn2)
Protein Information
| Accession | O88703 |
|---|---|
| Protein Names | Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 (Brain cyclic nucleotide-gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) |
| Gene Symbol | Hcn2 |
| Organism | Mus musculus (Mouse) |
| Length | 863 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDARGGGGRP11GDSPGTTPAP21GPPPPPPPPA31PPQPQPPPAP41PPNPTTPSHP
51-10051ESADEPGPRA61RLCSRDSACT71PGAAKGGANG81ECGRGEPQCS91PEGPARGPKV
101-150101SFSCRGAASG111PSAAEEAGSE121EAGPAGEPRG131SQASFLQRQF141GALLQPGVNK
151-200151FSLRMFGSQK161AVEREQERVK171SAGAWIIHPY181SDFRFYWDFT191MLLFMVGNLI
201-250201IIPVGITFFK211DETTAPWIVF221NVVSDTFFLM231DLVLNFRTGI241VIEDNTEIIL
251-300251DPEKIKKKYL261RTWFVVDFVS271SIPVDYIFLI281VEKGIDSEVY291KTARALRIVR
301-350301FTKILSLLRL311LRLSRLIRYI321HQWEEIFHMT331YDLASAVMRI341CNLISMMLLL
351-400351CHWDGCLQFL361VPMLQDFPSD371CWVSINNMVN381HSWSELYSFA391LFKAMSHMLC
401-450401IGYGRQAPES411MTDIWLTMLS421MIVGATCYAM431FIGHATALIQ441SLDSSRRQYQ
451-500451EKYKQVEQYM461SFHKLPADFR471QKIHDYYEHR481YQGKMFDEDS491ILGELNGPLR
501-550501EEIVNFNCRK511LVASMPLFAN521ADPNFVTAML531TKLKFEVFQP541GDYIIREGTI
551-600551GKKMYFIQHG561VVSVLTKGNK571EMKLSDGSYF581GEICLLTRGR591RTASVRADTY
601-650601CRLYSLSVDN611FNEVLEEYPM621MRRAFETVAI631DRLDRIGKKN641SILLHKVQHD
651-700651LSSGVFNNQE661NAIIQEIVKY671DREMVQQAEL681GQRVGLFPPP691PPPQVTSAIA
701-750701TLQQAVAMSF711CPQVARPLVG721PLALGSPRLV731RRAPPGPLPP741AASPGPPAAS
751-800751PPAAPSSPRA761PRTSPYGVPG771SPATRVGPAL781PARRLSRASR791PLSASQPSLP
801-850801HGVPAPSPAA811SARPASSSTP821RLGPAPTART831AAPSPDRRDS841ASPGAASGLD
851-863851PLDSARSRLS861SNL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 63 | DBPTM SWISSPALM | - | - | - |
Deep-Palm: 0.90
|
| 69 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.91
|
| 82 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.85
|
| 89 | DBPTM SWISSPALM | - | - | - |
Deep-Palm: 0.86
|
| 104 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.97
|
| 341 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.03
|
|
| 351 | - | - | - |
Deep-Palm: 0.06
|
|
| 356 | - | - | - |
Deep-Palm: 0.04
|
|
| 371 | - | - | - |
Deep-Palm: 0.03
|
|
| 400 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.45
|
|
| 427 | - | - | - |
Deep-Palm: 0.13
|
|
| 508 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.95
|
|
| 584 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.94
|
|
| 601 | - | - | - |
Deep-Palm: 0.95
|
|
| 711 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 0.400
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.600
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.