Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O88844 | Idh1 | Isocitrate dehydrogenase [NADP] cytoplasmic (IDH) … | Mus musculus (Mouse) | 414 aa |
Protein Details: O88844 (Idh1)
Protein Information
| Accession | O88844 |
|---|---|
| Protein Names | Isocitrate dehydrogenase [NADP] cytoplasmic (IDH) (IDH1) (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase) (IDPc) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) |
| Gene Symbol | Idh1 |
| Organism | Mus musculus (Mouse) |
| Length | 414 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26165157 28526873 29575903 31772009 34884899 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.655
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.655
19/19 (100.0%)
6
Liver membrane
Specificity: 0.207
6/6 (100.0%)
3
Neural Stem Cells
Specificity: 0.103
3/3 (100.0%)
1
Macrophage Raw 264.7
Specificity: 0.034
1/2 (50.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSRKIQGGSV11VEMQGDEMTR21IIWELIKEKL31ILPYVELDLH41SYDLGIENRD
51-10051ATNDQVTKDA61AEAIKKYNVG71VKCATITPDE81KRVEEFKLKQ91MWKSPNGTIR
101-150101NILGGTVFRE111AIICKNIPRL121VTGWVKPIII131GRHAYGDQYR141ATDFVVPGPG
151-200151KVEITYTPKD161GTQKVTYMVH171DFEEGGGVAM181GMYNQDKSIE191DFAHSSFQMA
201-250201LSKGWPLYLS211TKNTILKKYD221GRFKDIFQEI231YDKKYKSQFE241AQKICYEHRL
251-300251IDDMVAQAMK261SEGGFIWACK271NYDGDVQSDS281VAQGYGSLGM291MTSVLICPDG
301-350301KTVEAEAAHG311TVTRHYRMYQ321KGQETSTNPI331ASIFAWSRGL341AHRAKLDNNT
351-400351ELSFFAKALE361DVCIETIEAG371FMTKDLAACI381KGLPNVQRSD391YLNTFEFMDK
401-414401LGENLKAKLA411QAKL
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 73 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 26165157, 39008777 |
| 114 | Prediction (Low) | - | - |
| 245 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Low) | - | 26165157 |
| 269 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | Isocitrate/isopropylmalate dehydrogenase | 28526873 |
| 297 | Prediction (Medium) | - | - |
| 363 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | - | 28526873 |
| 379 | Prediction (High) | - | - |