Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O88986 | Gcat | 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial … | Mus musculus (Mouse) | 416 aa |
Protein Details: O88986 (Gcat)
Protein Information
| Accession | O88986 |
|---|---|
| Protein Names | 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial (AKB ligase) (EC 2.3.1.29) (Aminoacetone synthase) (Glycine acetyltransferase) |
| Gene Symbol | Gcat |
| Organism | Mus musculus (Mouse) |
| Length | 416 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MWASFMWHGA11LSPGRRAHSA21LAQLRCILDS31ELEGIRGAGT41WKSERVITSR
51-10051QGPSIRVDGI61SGGILNFCAN71NYLGLSSHPA81VIQAGLQTLE91EFGAGLSSTR
101-150101FICGTQSIHK111NLEAKIAHFH121QREDAILYPS131CFDANAGLFE141ALLTPEDAVL
151-200151SDELNHASII161DGIRLCKAHK171YRYRHLDMAD181LEAKLKEAQK191HRLRLVATDG
201-250201AFSMDGDIAP211LQDICRLAAQ221YGALVFVDEC231HATGFLGPTG241RGTDELLGVM
251-300251DQVTIINSTL261GKALGGASGG271YTTGPEPLVS281LLRQRSRPYL291FSNSLPPAVV
301-350301GCASKALDLL311MESNAIIQSM321AAKTRRFRSK331MEAAGFTVSG341ADHPICPVML
351-400351GDARLSSQMA361DDMLKKGIFV371IGFSYPVVPK381GKARIRVQIS391AVHSEEDIDR
401-416401CVEAFVEVGR411LHGALP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 26 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
| - |
Deep-Palm: 0.98
|
| 68 | - | - | - |
Deep-Palm: 0.96
|
|
| 103 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.96
|
| 131 | - | - | - |
Deep-Palm: 0.64
|
|
| 166 | - | - | - |
Deep-Palm: 0.52
|
|
| 215 | SWISSPALM DBPTM CYSMODDB | Aminotransferase class I and II |
Liver
(28526873)
| - |
Deep-Palm: 0.92
|
| 230 | - | - | - |
Deep-Palm: 0.95
|
|
| 302 | - | - | - |
Deep-Palm: 0.96
|
|
| 346 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
| 401 | - | - | - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.429
6/6 (100.0%)
2
Testis
Specificity: 0.143
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.429
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.