Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O89112 | Lancl1 | Glutathione S-transferase LANCL1 (EC 2.5.1.18) … | Mus musculus (Mouse) | 399 aa |
Protein Details: O89112 (Lancl1)
Protein Information
| Accession | O89112 |
|---|---|
| Protein Names | Glutathione S-transferase LANCL1 (EC 2.5.1.18) (40 kDa erythrocyte membrane protein) (p40) (LanC-like protein 1) |
| Gene Symbol | Lancl1 |
| Organism | Mus musculus (Mouse) |
| Length | 399 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAQRAFPNPY11ADYNKSLAEN21YFDSTGRLTP31EFSHRLTNKI41RELLQQMERG
51-10051LKSADPRDGT61GYTGWAGIAV71LYLHLHNVFG81DPAYLQMAHS91YVKQSLNCLS
101-150101RRSITFLCGD111AGPLAVAAVL121YHKMNSEKQA131EECITRLIHL141NKIDPHVPNE
151-200151MLYGRIGYIF161ALLFVNKNFG171EEKIPQSHIQ181QICENILTSG191ENLSRKRNLA
201-250201AKSPLMYEWY211QEYYVGAAHG221LAGIYYYLMQ231PSLQVNQGKL241HSLVKPSVDF
251-300251VCRLKFPSGN261YPPCLDDTRD271LLVHWCHGAP281GVIYMLIQAY291KVFKEERYLC
301-350301DAQQCADVIW311QYGLLKKGYG321LCHGAAGNAY331AFLALYNLTQ341DLKYLYRACK
351-399351FAEWCLDYGE361HGCRTADTPF371SLFEGMAGTI381YFLADLLVPT391KAKFPAFEL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 98 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.84
Deep-Palm: 0.68
|
|
| 108 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.72
Deep-Palm: 0.95
|
|
| 133 | Lanthionine synthetase C-like protein |
Brain
(31311849)
|
Brain
(31311849)
|
GPS-Palm: 0.67
Deep-Palm: 0.20
|
|
| 183 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.66
Deep-Palm: 0.67
|
| 252 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.86
Deep-Palm: 0.78
|
|
| 264 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.28
|
|
| 276 | - | - | - |
Deep-Palm: 0.19
|
|
| 300 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.62
|
|
| 305 | SWISSPALM DBPTM CYSMODDB | Lanthionine synthetase C-like protein |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.73
|
| 322 | - | - | - |
Deep-Palm: 0.73
|
|
| 349 | - | - | - |
Deep-Palm: 0.38
|
|
| 355 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.23
|
|
| 363 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.24
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
3
Brain
Specificity: 0.088
3/3 (100.0%)
3
Liver
Specificity: 0.088
3/3 (100.0%)
2
Testis
Specificity: 0.059
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
26
Brain tissue (Mass)
Specificity: 0.765
26/56 (46.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.