Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O94832 | MYO1D | Unconventional myosin-Id | Homo sapiens (Human) | 1006 aa |
Protein Details: O94832 (MYO1D)
Protein Information
| Accession | O94832 |
|---|---|
| Protein Names | Unconventional myosin-Id |
| Gene Symbol | MYO1D |
| Organism | Homo sapiens (Human) |
| Length | 1006 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAEQESLEFG11KADFVLMDTV21SMPEFMANLR31LRFEKGRIYT41FIGEVVVSVN
51-10051PYKLLNIYGR61DTIEQYKGRE71LYERPPHLFA81IADAAYKAMK91RRSKDTCIVI
101-150101SGESGAGKTE111ASKYIMQYIA121AITNPSQRAE131VERVKNMLLK141SNCVLEAFGN
151-200151AKTNRNDNSS161RFGKYMDINF171DFKGDPIGGH181INNYLLEKSR191VIVQQPGERS
201-250201FHSFYQLLQG211GSEQMLRSLH221LQKSLSSYNY231IHVGAQLKSS241INDAAEFRVV
251-300251ADAMKVIGFK261PEEIQTVYKI271LAAILHLGNL281KFVVDGDTPL291IENGKVVSII
301-350301AELLSTKTDM311VEKALLYRTV321ATGRDIIDKQ331HTEQEASYGR341DAFAKAIYER
351-400351LFCWIVTRIN361DIIEVKNYDT371TIHGKNTVIG381VLDIYGFEIF391DNNSFEQFCI
401-450401NYCNEKLQQL411FIQLVLKQEQ421EEYQREGIPW431KHIDYFNNQI441IVDLVEQQHK
451-500451GIIAILDDAC461MNVGKVTDEM471FLEALNSKLG481KHAHFSSRKL491CASDKILEFD
501-550501RDFRIRHYAG511DVVYSVIGFI521DKNKDTLFQD531FKRLMYNSSN541PVLKNMWPEG
551-600551KLSITEVTKR561PLTAATLFKN571SMIALVDNLA581SKEPYYVRCI591KPNDKKSPQI
601-650601FDDERCRHQV611EYLGLLENVR621VRRAGFAFRQ631TYEKFLHRYK641MISEFTWPNH
651-700651DLPSDKEAVK661KLIERCGFQD671DVAYGKTKIF681IRTPRTLFTL691EELRAQMLIR
701-750701IVLFLQKVWR711GTLARMRYKR721TKAALTIIRY731YRRYKVKSYI741HEVARRFHGV
751-800751KTMRDYGKHV761KWPSPPKVLR771RFEEALQTIF781NRWRASQLIK791SIPASDLPQV
801-850801RAKVAAVEML811KGQRADLGLQ821RAWEGNYLAS831KPDTPQTSGT841FVPVANELKR
851-900851KDKYMNVLFS861CHVRKVNRFS871KVEDRAIFVT881DRHLYKMDPT891KQYKVMKTIP
901-950901LYNLTGLSVS911NGKDQLVVFH921TKDNKDLIVC931LFSKQPTHES941RIGELVGVLV
951-1000951NHFKSEKRHL961QVNVTNPVQC971SLHGKKCTVS981VETRLNQPQP991DFTKNRSGFI
1001-10061001LSVPGN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 97 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.92
|
|
| 143 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.91
|
|
| 353 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.41
|
|
| 399 | - | - | - |
Deep-Palm: 0.03
|
|
| 403 | - | - | - |
Deep-Palm: 0.04
|
|
| 460 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.54
|
|
| 491 | SWISSPALM DBPTM CYSMODDB | Myosin head (motor domain) | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.83
|
| 589 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.76
|
|
| 606 | - | - | - |
Deep-Palm: 0.68
|
|
| 666 | - | - | - |
Deep-Palm: 0.96
|
|
| 861 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.75
|
|
| 930 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.82
|
|
| 970 | - | - | - |
Deep-Palm: 0.57
|
|
| 977 | - | - | - |
Deep-Palm: 0.34
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
LNCaP
Specificity: 0.375
3/3 (100.0%)
3
cerebral cortex
Specificity: 0.375
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Cerebral Cortex (Mass)
Specificity: 0.250
2/4 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 69 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 148 | F → _G149insPKASNCVLEAF | 0.002141 | INS | In Frame Ins | SKCM |
| 350 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 588 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 588 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 605 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 622 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 622 | R → C | 0.004577 | SNP | Missense Mutation | STAD |
| 622 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 622 | R → C | 0.006993 | SNP | Missense Mutation | LAML |
| 622 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 629 | R → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 770 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 864 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 882 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |