Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O94911-3 | ABCA8 | ABC-type organic anion transporter ABCA8 … | Homo sapiens (Human) | 1621 aa |
Protein Details: O94911-3 (ABCA8)
Protein Information
| Accession | O94911-3 |
|---|---|
| Protein Names | ABC-type organic anion transporter ABCA8 (EC 7.6.2.-) (ATP-binding cassette sub-family A member 8) |
| Gene Symbol | ABCA8 |
| Organism | Homo sapiens (Human) |
| Length | 1621 aa |
| Isoforms | |
| Related PMIDs | 33636221 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRKRKISVCQ11QTWALLCKNF21LKKWRMKRES31LMEWLNSLLL41LLCLYIYPHS
51-10051HQVNDFSSLL61TMDLGRVDTF71NESRFSVVYT81PVTNTTQQIM91NKVASTPFLA
101-150101GKEVLGLPDE111ESIKEFTANY121PEEIVRVTFT131NTYSYHLKFL141LGHGMPAKKE
151-200151HKDHTAHCYE161TNEDVYCEVS171VFWKEGFVAL181QAAINAAIIE191ITTNHSVMEE
201-250201LMSVTGKNMK211MHSFIGQSGV221ITDLYLFSCI231ISFSSFIYYA241SVNVTRERKR
251-300251MKALMTMMGL261RDSAFWLSWG271LLYAGFIFIM281ALFLALVIRS291TQFIILSGFM
301-350301VVFSLFLLYG311LSLVALAFLM321SILVKKSFLT331GLVVFLLTVF341WGCLGFTSLY
351-400351RHLPASLEWI361LSLLSPFAFM371LGMAQLLHLD381YDLNSNAFPH391PSDGSNLIVA
401-450401TNFMLAFDTC411LYLALAIYFE421KILPNEYGHR431RPPLFFLKSS441FWSQTQKTDH
451-500451VALEDEMDAD461PSFHDSFEQA471PPEFQGKEAI481RIRNVTKEYK491GKPDKIEALK
501-550501DLVFDIYEGQ511ITAILGHSGA521GKSTLLNILS531GLSVPTKGSV541TIYNNKLSEM
551-600551ADLENLSKLT561GVCPQSNVQF571DFLTVRENLR581LFAKIKGILP591QEVDKEIQRV
601-650601LLELEMKNIQ611DVLAQNLSGG621QKRKLTFGIA631ILGDPQIFLL641DEPTAGLDPF
651-700651SRHQVWNLLK661ERKTDRVILF671STQFMDEADI681LADRKVFLSQ691GKLKCAGSSL
701-750701FLKKKWGIGY711HLSLQLNEIC721VEENITSLVK731QHIPDAKLSA741KSEGKLIYTL
751-800751PLERTNKFPE761LYKDLDSYPD771LGIENYGVSM781TTLNEVFLKL791EGKSTINESD
801-850801IAILGEVQAE811KADDTERLVE821MEQVLSSLNK831MRKTIGGVAL841WRQQICAIAR
851-900851VRLLKLKHER861KALLALLLIL871MAGFCPLLVE881YTMVKIYQNS891YTWELSPHLY
901-950901FLAPGQQPHD911PLTQLLIINK921TGASIDDFIQ931SVEHQNIALE941VDAFGTRNGT
951-1000951DDPSYNGAIT961VCCNEKNYSF971SLACNAKRLN981CFPVLMDIVS991NGLLGMVKPS
1001-10501001VHIRTERSTF1011LENGQDNPIG1021FLAYIMFWLV1031LTSSCPPYIA1041MSSIDDYKNR
1051-11001051ARSQLRISGL1061SPSAYWFGQA1071LVDVSLYFLV1081FVFIYLMSYI1091SNFEDMLLTI
1101-11501101IHIIQIPCAV1111GYSFSLIFMT1121YVISFIFRKG1131RKNSGIWSFC1141FYVVTVFSVA
1151-12001151GFAFSIFESD1161IPFIFTFLIP1171PATMIGCLFL1181SSHLLFSSLF1191SEERMDVQPF
1201-12501201LVFLIPFLHF1211IIFLFTLRCL1221EWKFGKKSMR1231KDPFFRISPR1241SSDVCQNPEE
1251-13001251PEGEDEDVQM1261ERVRTANALN1271STNFDEKPVI1281IASCLRKEYA1291GKRKGCFSKR
1301-13501301KNKIATRNVS1311FCVRKGEVLG1321LLGHNGAGKS1331TSIKVITGDT1341KPTAGQVLLK
1351-14001351GSGGGDALEF1361LGYCPQENAL1371WPNLTVRQHL1381EVYAAVKGLR1391KGDAEVAITR
1401-14501401LVDALKLQDQ1411LKSPVKTLSE1421GIKRKLCFVL1431SILGNPSVVL1441LDEPSTGMDP
1451-15001451EGQQQMWQAI1461RATFRNTERG1471ALLTTHYMAE1481AEAVCDRVAI1491MVSGRLRCIG
1501-15501501SIQHLKSKFG1511KDYLLEMKVK1521NLAQVEPLHA1531EILRLFPQAA1541RQERYSSLMV
1551-16001551YKLPVEDVQP1561LAQAFFKLEK1571VKQSFDLEEY1581SLSQSTLEQV1591FLELSKEQEL
1601-16211601GDFEEDFDPS1611VKWKLLPQEE1621P
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
Deep-Palm: 0.04
|
|
| 17 | - | - | - |
Deep-Palm: 0.93
|
|
| 43 | - | - | - |
Deep-Palm: 0.91
|
|
| 158 | - | - | - |
Deep-Palm: 0.03
|
|
| 167 | - | - | - |
Deep-Palm: 0.09
|
|
| 229 | - | - | - |
Deep-Palm: 0.12
|
|
| 343 | - | - | - |
Deep-Palm: 0.97
|
|
| 410 | - | - | - |
Deep-Palm: 0.27
|
|
| 563 | - | - | - |
Deep-Palm: 0.86
|
|
| 695 | - | - | - |
Deep-Palm: 0.98
|
|
| 720 | - | - | - |
Deep-Palm: 0.32
|
|
| 846 | - | - | - |
Deep-Palm: 0.98
|
|
| 875 | - | - | - |
Deep-Palm: 0.98
|
|
| 962 | - | - | - |
Deep-Palm: 0.08
|
|
| 963 | - | - | - |
Deep-Palm: 0.10
|
|
| 974 | - | - | - |
Deep-Palm: 0.19
|
|
| 981 | - | - | - |
Deep-Palm: 0.74
|
|
| 1035 | - | - | - |
Deep-Palm: 0.14
|
|
| 1108 | - | - | - |
Deep-Palm: 0.05
|
|
| 1140 | - | - | - |
Deep-Palm: 0.43
|
|
| 1177 | - | - | - |
Deep-Palm: 0.72
|
|
| 1219 | - | - | - |
Deep-Palm: 0.77
|
|
| 1245 | - | - | - |
Deep-Palm: 0.41
|
|
| 1284 | - | - | - |
Deep-Palm: 0.86
|
|
| 1296 | - | - | - |
Deep-Palm: 0.88
|
|
| 1312 | - | - | - |
Deep-Palm: 0.97
|
|
| 1364 | - | - | - |
Deep-Palm: 0.95
|
|
| 1427 | - | - | - |
Deep-Palm: 0.98
|
|
| 1485 | - | - | - |
Deep-Palm: 0.97
|
|
| 1498 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
cerebral cortex
Specificity: 0.750
3/3 (100.0%)
1
heart
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 17 | C → F | 0.002033 | SNP | Missense Mutation | LUSC |
| 229 | C → S | 0.002033 | SNP | Missense Mutation | LUSC |
| 270 | G → C | 0.002506 | SNP | Missense Mutation | COAD |
| 290 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 331 | G → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 626 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 655 | C → C | 0.001887 | SNP | Silent | UCEC |
| 655 | C → C | 0.005435 | SNP | Silent | ESCA |
| 718 | F → C | 0.002506 | SNP | Missense Mutation | COAD |
| 718 | F → C | 0.007299 | SNP | Missense Mutation | READ |
| 806 | C → W | 0.001969 | SNP | Missense Mutation | HNSC |
| 812 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 812 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1036 | L → Cfs*11 | 0.001764 | DEL | Frame Shift Del | LUAD |
| 1049 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1194 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1205 | C → delins* | 0.002141 | INS | Nonsense Mutation | SKCM |
| 1255 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1343 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |