Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O95477 | ABCA1 | Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) … | Homo sapiens (Human) | 2261 aa |
Protein Details: O95477 (ABCA1)
Protein Information
| Accession | O95477 |
|---|---|
| Protein Names | Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 1) (ATP-binding cassette transporter 1) (ABC-1) (ATP-binding cassette 1) (Cholesterol efflux regulatory protein) |
| Gene Symbol | ABCA1 |
| Organism | Homo sapiens (Human) |
| Length | 2261 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MACWPQLRLL11LWKNLTFRRR21QTCQLLLEVA31WPLFIFLILI41SVRLSYPPYE
51-10051QHECHFPNKA61MPSAGTLPWV71QGIICNANNP81CFRYPTPGEA91PGVVGNFNKS
101-150101IVARLFSDAR111RLLLYSQKDT121SMKDMRKVLR131TLQQIKKSSS141NLKLQDFLVD
151-200151NETFSGFLYH161NLSLPKSTVD171KMLRADVILH181KVFLQGYQLH191LTSLCNGSKS
201-250201EEMIQLGDQE211VSELCGLPRE221KLAAAERVLR231SNMDILKPIL241RTLNSTSPFP
251-300251SKELAEATKT261LLHSLGTLAQ271ELFSMRSWSD281MRQEVMFLTN291VNSSSSSTQI
301-350301YQAVSRIVCG311HPEGGGLKIK321SLNWYEDNNY331KALFGGNGTE341EDAETFYDNS
351-400351TTPYCNDLMK361NLESSPLSRI371IWKALKPLLV381GKILYTPDTP391ATRQVMAEVN
401-450401KTFQELAVFH411DLEGMWEELS421PKIWTFMENS431QEMDLVRMLL441DSRDNDHFWE
451-500451QQLDGLDWTA461QDIVAFLAKH471PEDVQSSNGS481VYTWREAFNE491TNQAIRTISR
501-550501FMECVNLNKL511EPIATEVWLI521NKSMELLDER531KFWAGIVFTG541ITPGSIELPH
551-600551HVKYKIRMDI561DNVERTNKIK571DGYWDPGPRA581DPFEDMRYVW591GGFAYLQDVV
601-650601EQAIIRVLTG611TEKKTGVYMQ621QMPYPCYVDD631IFLRVMSRSM641PLFMTLAWIY
651-700651SVAVIIKGIV661YEKEARLKET671MRIMGLDNSI681LWFSWFISSL691IPLLVSAGLL
701-750701VVILKLGNLL711PYSDPSVVFV721FLSVFAVVTI731LQCFLISTLF741SRANLAAACG
751-800751GIIYFTLYLP761YVLCVAWQDY771VGFTLKIFAS781LLSPVAFGFG791CEYFALFEEQ
801-850801GIGVQWDNLF811ESPVEEDGFN821LTTSVSMMLF831DTFLYGVMTW841YIEAVFPGQY
851-900851GIPRPWYFPC861TKSYWFGEES871DEKSHPGSNQ881KRISEICMEE891EPTHLKLGVS
901-950901IQNLVKVYRD911GMKVAVDGLA921LNFYEGQITS931FLGHNGAGKT941TTMSILTGLF
951-1000951PPTSGTAYIL961GKDIRSEMST971IRQNLGVCPQ981HNVLFDMLTV991EEHIWFYARL
1001-10501001KGLSEKHVKA1011EMEQMALDVG1021LPSSKLKSKT1031SQLSGGMQRK1041LSVALAFVGG
1051-11001051SKVVILDEPT1061AGVDPYSRRG1071IWELLLKYRQ1081GRTIILSTHH1091MDEADVLGDR
1101-11501101IAIISHGKLC1111CVGSSLFLKN1121QLGTGYYLTL1131VKKDVESSLS1141SCRNSSSTVS
1151-12001151YLKKEDSVSQ1161SSSDAGLGSD1171HESDTLTIDV1181SAISNLIRKH1191VSEARLVEDI
1201-12501201GHELTYVLPY1211EAAKEGAFVE1221LFHEIDDRLS1231DLGISSYGIS1241ETTLEEIFLK
1251-13001251VAEESGVDAE1261TSDGTLPARR1271NRRAFGDKQS1281CLRPFTEDDA1291ADPNDSDIDP
1301-13501301ESRETDLLSG1311MDGKGSYQVK1321GWKLTQQQFV1331ALLWKRLLIA1341RRSRKGFFAQ
1351-14001351IVLPAVFVCI1361ALVFSLIVPP1371FGKYPSLELQ1381PWMYNEQYTF1391VSNDAPEDTG
1401-14501401TLELLNALTK1411DPGFGTRCME1421GNPIPDTPCQ1431AGEEEWTTAP1441VPQTIMDLFQ
1451-15001451NGNWTMQNPS1461PACQCSSDKI1471KKMLPVCPPG1481AGGLPPPQRK1491QNTADILQDL
1501-15501501TGRNISDYLV1511KTYVQIIAKS1521LKNKIWVNEF1531RYGGFSLGVS1541NTQALPPSQE
1551-16001551VNDAIKQMKK1561HLKLAKDSSA1571DRFLNSLGRF1581MTGLDTKNNV1591KVWFNNKGWH
1601-16501601AISSFLNVIN1611NAILRANLQK1621GENPSHYGIT1631AFNHPLNLTK1641QQLSEVALMT
1651-17001651TSVDVLVSIC1661VIFAMSFVPA1671SFVVFLIQER1681VSKAKHLQFI1691SGVKPVIYWL
1701-17501701SNFVWDMCNY1711VVPATLVIII1721FICFQQKSYV1731SSTNLPVLAL1741LLLLYGWSIT
1751-18001751PLMYPASFVF1761KIPSTAYVVL1771TSVNLFIGIN1781GSVATFVLEL1791FTDNKLNNIN
1801-18501801DILKSVFLIF1811PHFCLGRGLI1821DMVKNQAMAD1831ALERFGENRF1841VSPLSWDLVG
1851-19001851RNLFAMAVEG1861VVFFLITVLI1871QYRFFIRPRP1881VNAKLSPLND1891EDEDVRRERQ
1901-19501901RILDGGGQND1911ILEIKELTKI1921YRRKRKPAVD1931RICVGIPPGE1941CFGLLGVNGA
1951-20001951GKSSTFKMLT1961GDTTVTRGDA1971FLNKNSILSN1981IHEVHQNMGY1991CPQFDAITEL
2001-20502001LTGREHVEFF2011ALLRGVPEKE2021VGKVGEWAIR2031KLGLVKYGEK2041YAGNYSGGNK
2051-21002051RKLSTAMALI2061GGPPVVFLDE2071PTTGMDPKAR2081RFLWNCALSV2091VKEGRSVVLT
2101-21502101SHSMEECEAL2111CTRMAIMVNG2121RFRCLGSVQH2131LKNRFGDGYT2141IVVRIAGSNP
2151-22002151DLKPVQDFFG2161LAFPGSVLKE2171KHRNMLQYQL2181PSSLSSLARI2191FSILSQSKKR
2201-22502201LHIEDYSVSQ2211TTLDQVFVNF2221AKDQSDDDHL2231KDLSLHKNQT2241VVDVAVLTSF
2251-22612251LQDEKVKESY2261V
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.04
|
| 23 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.94
|
| 54 | - | - | - |
Deep-Palm: 0.22
|
|
| 75 | - | - | - |
Deep-Palm: 0.56
|
|
| 81 | - | - | - |
Deep-Palm: 0.21
|
|
| 195 | - | - | - |
Deep-Palm: 0.80
|
|
| 215 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.98
|
|
| 309 | - | - | - |
Deep-Palm: 0.95
|
|
| 355 | - | - | - |
Deep-Palm: 0.58
|
|
| 504 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.73
|
|
| 626 | - | - | - |
Deep-Palm: 0.07
|
|
| 733 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.85
|
|
| 749 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.90
|
|
| 764 | - | - | - |
Deep-Palm: 0.29
|
|
| 791 | - | - | - |
Deep-Palm: 0.93
|
|
| 860 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.17
|
|
| 887 | - | - | - |
Deep-Palm: 0.78
|
|
| 978 | - | - | - |
Deep-Palm: 0.42
|
|
| 1110 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 1111 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
| 1142 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.95
|
|
| 1281 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.89
|
|
| 1359 | - | - | - |
Deep-Palm: 0.85
|
|
| 1418 | - | - | - |
Deep-Palm: 0.87
|
|
| 1429 | - | - | - |
Deep-Palm: 0.20
|
|
| 1463 | - | - | - |
Deep-Palm: 0.05
|
|
| 1465 | - | - | - |
Deep-Palm: 0.04
|
|
| 1477 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.84
|
|
| 1660 | - | - | - |
Deep-Palm: 0.27
|
|
| 1708 | - | - | - |
Deep-Palm: 0.05
|
|
| 1723 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.38
|
|
| 1814 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.86
|
|
| 1933 | - | - |
LNCaP
(31251020)
|
GPS-Palm: 0.72
Deep-Palm: 0.95
|
|
| 1941 | - | - | - |
Deep-Palm: 0.96
|
|
| 1991 | - | - | - |
Deep-Palm: 0.10
|
|
| 2086 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
|
| 2107 | - | - | - |
Deep-Palm: 0.93
|
|
| 2111 | - | - | - |
Deep-Palm: 0.83
|
|
| 2124 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 54 | C → S | 0.002976 | SNP | Missense Mutation | KIRC |
| 75 | C → C | 0.002506 | SNP | Silent | COAD |
| 104 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 104 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 214 | L → _C215insEPRR | 0.002294 | INS | In Frame Ins | OV |
| 215 | C → delinsWS | 0.002294 | INS | In Frame Ins | OV |
| 309 | C → C | 0.002506 | SNP | Silent | COAD |
| 500 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1159 | S → C | 0.005435 | SNP | Missense Mutation | ESCA |
| 1264 | G → _T1265insPLCSAAF*TL | 0.002020 | INS | Nonsense Mutation | PRAD |
| 1283 | R → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 1296 | S → C | 0.003460 | SNP | Missense Mutation | CESC |
| 1313 | G → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 1382 | W → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 1484 | L → Cfs*17 | 0.002288 | DEL | Frame Shift Del | STAD |
| 1933 | C → C | 0.002288 | SNP | Silent | STAD |
| 1941 | C → C | 0.007299 | SNP | Splice Region | READ |
| 2029 | I → _R2030insLCCCI | 0.001887 | INS | In Frame Ins | UCEC |
| 2107 | C → C | 0.002288 | SNP | Silent | STAD |
| 2182 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 2260 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |
| 1111* | C → ? | 0.002033 | SNP | Nonsense Mutation | LUSC |
| 2124* | C → ? | 0.001887 | SNP | Nonsense Mutation | UCEC |