Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O95857 | TSPAN13; NET6; TM4SF13; UNQ260/PRO296 | Tetraspanin-13 (Tspan-13) (Tetraspan NET-6) (Transmembrane … | Homo sapiens (Human) | 204 aa |
Protein Details: O95857 (TSPAN13)
Protein Information
| Accession | O95857 |
|---|---|
| Protein Names | Tetraspanin-13 (Tspan-13) (Tetraspan NET-6) (Transmembrane 4 superfamily member 13) |
| Gene Symbol | TSPAN13; NET6; TM4SF13; UNQ260/PRO296 |
| Organism | Homo sapiens (Human) |
| Length | 204 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 37611173 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
38
LNCaP cells
Specificity: 1.000
38/46 (82.6%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MVCGGFACSK11NCLCALNLLY21TLVSLLLIGI31AAWGIGFGLI41SSLRVVGVVI
51-10051AVGIFLFLIA61LVGLIGAVKH71HQVLLFFYMI81ILLLVFIVQF91SVSCACLALN
101-150101QEQQGQLLEV111GWNNTASARN121DIQRNLNCCG131FRSVNPNDTC141LASCVKSDHS
151-200151CSPCAPIIGE161YAGEVLRFVG171GIGLFFSFTE181ILGVWLTYRY191RNQKDPRANP
201-204201SAFL
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 3 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 37611173 |
| 8 | CYSMODDB SWISSPALM DBPTM Prediction (High) | - | - |
| 12 | Prediction (Medium) | - | - |
| 14 | Prediction (Medium) | - | - |
| 94 | Prediction (Medium) | - | - |
| 96 | Prediction (Medium) | - | - |
| 128 | Prediction (Medium) | - | - |
| 140 | Prediction (Low) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 140 | C → F | 0.002545 | SNP | Missense Mutation | GBM |