Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P00342 | Ldhc | L-lactate dehydrogenase C chain (LDH-C) … | Mus musculus (Mouse) | 332 aa |
Protein Details: P00342 (Ldhc)
Protein Information
| Accession | P00342 |
|---|---|
| Protein Names | L-lactate dehydrogenase C chain (LDH-C) (EC 1.1.1.27) (LDH testis subunit) (LDH-X) |
| Gene Symbol | Ldhc |
| Organism | Mus musculus (Mouse) |
| Length | 332 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSTVKEQLIQ11NLVPEDKLSR21CKITVVGVGN31VGMACAISIL41LKGLADELAL
51-10051VDADTNKLRG61EALDLLHGSL71FLSTPKIVFG81KDYNVSANSK91LVIITAGARM
101-150101VSGETRLDLL111QRNVAIMKAI121VPGIVQNSPD131CKIIIVTNPV141DILTYVVWKI
151-200151SGFPVGRVIG161SGCNLDSARF171RYLIGEKLGV181NPTSCHGWVL191GEHGDSSVPI
201-250201WSGVNVAGVT211LKSLNPAIGT221DSDKEHWKNV231HKQVVEGGYE241VLNMKGYTSW
251-300251AIGLSVTDLA261RSILKNLKRV271HPVTTLVKGF281HGIKEEVFLS291IPCVLGQSGI
301-332301TDFVKVNMTA311EEEGLLKKSA321DTLWNMQKDL331QL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 21 | NAD(P)-binding domain superfamily Prokaryotic membrane lipoprotein lipid attachment site profile. L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) | - | - |
Deep-Palm: 0.89
|
|
| 35 | L-lactate/malate dehydrogenase L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) NAD(P)-binding domain superfamily Lactate/malate dehydrogenase, N-terminal | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 131 | - | - | - |
Deep-Palm: 0.77
|
|
| 163 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(34200797)
|
Liver
(37925639)
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.95
|
| 185 | - | - | - |
Deep-Palm: 0.95
|
|
| 293 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
Brain
Specificity: 0.286
2/2 (100.0%)
2
Testis
Specificity: 0.286
2/2 (100.0%)
1
Liver
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver tissue (Mass)
Specificity: 0.286
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.