Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P01029 | C4b | Complement C4-B [Cleaved into: Complement … | Mus musculus (Mouse) | 1738 aa |
Protein Details: P01029 (C4b)
Protein Information
| Accession | P01029 |
|---|---|
| Protein Names | Complement C4-B [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4b-B; Complement C4 gamma chain] |
| Gene Symbol | C4b |
| Organism | Mus musculus (Mouse) |
| Length | 1738 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRLLWGLAWV11FSFCASSLQK21PRLLLFSPSV31VNLGTPLSVG41VQLLDAPPGQ
51-10051EVKGSVFLRN61PKGGSCSPKK71DFKLSSGDDF81VLLSLEVPLE91DVRSCGLFDL
101-150101RRAPHIQLVA111QSPWLRNTAF121KATETQGVNL131LFSSRRGHIF141VQTDQPIYNP
151-200151GQRVRYRVFA161LDQKMRPSTD171FLTITVENSH181GLRVLKKEIF191TSTSIFQDAF
201-250201TIPDISEPGT211WKISARFSDG221LESNRSTHFE231VKKYVLPNFE241VKITPWKPYI
251-300251LMVPSNSDEI261QLDIQARYIY271GKPVQGVAYT281RFALMDEQGK291RTFLRGLETQ
301-350301AKLVEGRTHI311SISKDQFQAA321LDKINIGVRD331LEGLRLYAAT341AVIESPGGEM
351-400351EEAELTSWRF361VSSAFSLDLS371RTKRHLVPGA381HFLLQALVQE391MSGSEASNVP
401-450401VKVSATLVSG411SDSQVLDIQQ421STNGIGQVSI431SFPIPPTVTE441LRLLVSAGSL
451-500451YPAIARLTVQ461APPSRGTGFL471SIEPLDPRSP481SVGDTFILNL491QPVGIPAPTF
501-550501SHYYYMIISR511GQIMAMGREP521RKTVTSVSVL531VDHQLAPSFY541FVAYFYHQGH
551-600551PVANSLLINI561QSRDCEGKLQ571LKVDGAKEYR581NADMMKLRIQ591TDSKALVALG
601-650601AVDMALYAVG611GRSHKPLDMS621KVFEVINSYN631VGCGPGGGDD641ALQVFQDAGL
651-700651AFSDGDRLTQ661TREDLSCPKE671KKSRQKRNVN681FQKAVSEKLG691QYSSPDAKRC
701-750701CQDGMTKLPM711KRTCEQRAAR721VPQQACREPF731LSCCKFAEDL741RRNQTRSQAH
751-800751LARNNHNMLQ761EEDLIDEDDI771LVRTSFPENW781LWRVEPVDSS791KLLTVWLPDS
801-850801MTTWEIHGVS811LSKSKGLCVA821KPTRVRVFRK831FHLHLRLPIS841IRRFEQFELR
851-900851PVLYNYLNDD861VAVSVHVTPV871EGLCLAGGGM881MAQQVTVPAG891SARPVAFSVV
901-950901PTAAANVPLK911VVARGVFDLG921DAVSKILQIE931KEGAIHREEL941VYNLDPLNNL
951-1000951GRTLEIPGSS961DPNIVPDGDF971SSLVRVTASE981PLETMGSEGA991LSPGGVASLL
1001-10501001RLPQGCAEQT1011MIYLAPTLTA1021SNYLDRTEQW1031SKLSPETKDH1041AVDLIQKGYM
1051-11001051RIQQFRKNDG1061SFGAWLHRDS1071STWLTAFVLK1081ILSLAQEQVG1091NSPEKLQETA
1101-11501101SWLLAQQLGD1111GSFHDPCPVI1121HRAMQGGLVG1131SDETVALTAF1141VVIALHHGLD
1151-12001151VFQDDDAKQL1161KNRVEASITK1171ANSFLGQKAS1181AGLLGAHAAA1191ITAYALTLTK
1201-12501201ASEDLRNVAH1211NSLMAMAEET1221GEHLYWGLVL1231GSQDKVVLRP1241TAPRSPTEPV
1251-13001251PQAPALWIET1261TAYALLHLLL1271REGKGKMADK1281AASWLTHQGS1291FHGAFRSTQD
1301-13501301TVVTLDALSA1311YWIASHTTEE1321KALNVTLSSM1331GRNGLKTHGL1341HLNNHQVKGL
1351-14001351EEELKFSLGS1361TISVKVEGNS1371KGTLKILRTY1381NVLDMKNTTC1391QDLQIEVKVT
1401-14501401GAVEYAWDAN1411EDYEDYYDMP1421AADDPSVPLQ1431PVTPLQLFEG1441RRSRRRREAP
1451-15001451KVVEEQESRV1461QYTVCIWRNG1471KLGLSGMAIA1481DITLLSGFHA1491LRADLEKLTS
1501-15501501LSDRYVSHFE1511TDGPHVLLYF1521DSVPTTRECV1531GFGASQEVVV1541GLVQPSSAVL
1551-16001551YDYYSPDHKC1561SVFYAAPTKS1571QLLATLCSGD1581VCQCAEGKCP1591RLLRSLERRV
1601-16501601EDKDGYRMRF1611ACYYPRVEYG1621FTVKVLREDG1631RAAFRLFESK1641ITQVLHFRKD
1651-17001651TMASIGQTRN1661FLSRASCRLR1671LEPNKEYLIM1681GMDGETSDNK1691GDPQYLLDSN
1701-17381701TWIEEMPSEQ1711MCKSTRHRAA1721CFQLKDFLME1731FSSRGCQV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.97
|
|
| 66 | - | - | - |
Deep-Palm: 0.96
|
|
| 95 | - | - | - |
Deep-Palm: 0.97
|
|
| 565 | - | - | - |
Deep-Palm: 0.94
|
|
| 633 | - | - | - |
Deep-Palm: 0.39
|
|
| 667 | - | - | - |
Deep-Palm: 0.88
|
|
| 700 | - | - | - |
Deep-Palm: 0.55
|
|
| 701 | - | - | - |
Deep-Palm: 0.49
|
|
| 714 | - | - | - |
Deep-Palm: 0.68
|
|
| 726 | - | - | - |
Deep-Palm: 0.82
|
|
| 733 | - | - | - |
Deep-Palm: 0.78
|
|
| 734 | - | - | - |
Deep-Palm: 0.80
|
|
| 818 | SWISSPALM DBPTM CYSMODDB | Alpha-2-macroglobulin family |
liver
(26165157)
| - |
Deep-Palm: 0.95
|
| 874 | - | - | - |
Deep-Palm: 0.96
|
|
| 1006 | - | - | - |
Deep-Palm: 0.98
|
|
| 1117 | - | - | - |
Deep-Palm: 0.93
|
|
| 1390 | - | - | - |
Deep-Palm: 0.61
|
|
| 1465 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.87
|
|
| 1529 | - | - | - |
Deep-Palm: 0.90
|
|
| 1560 | - | - | - |
Deep-Palm: 0.61
|
|
| 1577 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.80
|
|
| 1582 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.96
|
|
| 1584 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.97
|
|
| 1589 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.95
|
|
| 1612 | - | - | - |
Deep-Palm: 0.69
|
|
| 1667 | - | - | - |
Deep-Palm: 0.93
|
|
| 1712 | - | - | - |
Deep-Palm: 0.13
|
|
| 1721 | - | - | - |
Deep-Palm: 0.36
|
|
| 1736 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.600
3/3 (100.0%)
2
Brain
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.