Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P01893 | HLA-H | Putative HLA class I histocompatibility … | Homo sapiens (Human) | 362 aa |
Protein Details: P01893 (HLA-H)
Protein Information
| Accession | P01893 |
|---|---|
| Protein Names | Putative HLA class I histocompatibility antigen, alpha chain H (HLA-12.4) (HLA-AR) (MHC class I antigen H) |
| Gene Symbol | HLA-H |
| Organism | Homo sapiens (Human) |
| Length | 362 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 31251020 32944167 |
| Database Sources | PTMDdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVLMAPRTLL11LLLSGALALT21QTWARSHSMR31YFYTTMSRPG41AGEPRFISVG
51-10051YVDDTQFVRF61DSDDASPREE71PRAPWMEREG81PKYWDRNTQI91CKAQAQTERE
101-150101NLRIALRYYN111QSEGGSHTMQ121VMYGCDVGPD131GPFLRGYEQH141AYDGKDYIAL
151-200151NEDLRSWTAA161DMAAQITKRK171WEAARRAEQR181RVYLEGEFVE191WLRRYLENGK
201-250201ETLQRADPPK211THMTHHPISD221HEATLRCWAL231GFYPAEITLT241WQRDGEDQTQ
251-300251DTELVETRPA261GDGTFQKWAA271VVVPSGEEQR281YTCHVQHEGL291PEPLTLRWEP
301-350301SSQPTVPIVG311IVAGLVLLVA321VVTGAVVAAV331MWRKKSSDRK341GGSYSQAASS
351-362351NSAQGSDVSL361TA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 91 | - | - | - |
Deep-Palm: 0.88
|
|
| 125 | - | - | - |
Deep-Palm: 0.18
|
|
| 227 | - | - | - |
Deep-Palm: 0.07
|
|
| 283 | DBPTM SWISSPALM | - | - | - |
Deep-Palm: 0.92
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
PC3
Specificity: 0.500
4/4 (100.0%)
3
LNCaP
Specificity: 0.375
3/3 (100.0%)
1
HeLa cell
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.