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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
P03899 mt-Nd3 NADH-ubiquinone oxidoreductase chain 3 (EC … Mus musculus (Mouse) 115 aa

Protein Details: P03899 (mt-Nd3)

Protein Information
AccessionP03899
Protein NamesNADH-ubiquinone oxidoreductase chain 3 (EC 7.1.1.2) (NADH dehydrogenase subunit 3)
Gene Symbolmt-Nd3
OrganismMus musculus (Mouse)
Length115 aa
IsoformsNo isoforms
Related PMIDs 28526873 37925639
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MNLYTVIFIN11ILLSLTLILV21AFWLPQMNLY31SEKANPYECG41FDPTSSARLP
51-10051FSMKFFLVAI61TFLLFDLEIA71LLLPLPWAIQ81TIKTSTMMIM91AFILVTILSL
101-115101GLAYEWTQKG111LEWTE
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
39 SWISSPALM DBPTM CYSMODDB NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 NADH:ubiquinone oxidoreductase, subunit 3 superfamily NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Liver (28526873)
Brain (35358180)
Brain (31311849)
Deep-Palm: 0.77
Score Interpretation:
GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine