Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
P04114 APOB Apolipoprotein B-100 (Apo B-100) [Cleaved … Homo sapiens (Human) 4563 aa

Protein Details: P04114 (APOB)

Protein Information
Accession P04114
Protein Names Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
Gene Symbol APOB
Organism Homo sapiens (Human)
Length 4563 aa
Isoforms No isoforms
Related PMIDs 33636221 37611173
Database Sources dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
1
Liver membrane
Specificity: 1.000
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
LNCaP cells
Specificity: 0.000
0/46 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDPPRPALLA11LLALPALLLL21LLAGARAEEE31MLENVSLVCP41KDATRFKHLR
51-10051KYTYNYEAES61SSGVPGTADS71RSATRINCKV81ELEVPQLCSF91ILKTSQCTLK
101-150101EVYGFNPEGK111ALLKKTKNSE121EFAAAMSRYE131LKLAIPEGKQ141VFLYPEKDEP
151-200151TYILNIKRGI161ISALLVPPET171EEAKQVLFLD181TVYGNCSTHF191TVKTRKGNVA
201-250201TEISTERDLG211QCDRFKPIRT221GISPLALIKG231MTRPLSTLIS241SSQSCQYTLD
251-300251AKRKHVAEAI261CKEQHLFLPF271SYKNKYGMVA281QVTQTLKLED291TPKINSRFFG
301-350301EGTKKMGLAF311ESTKSTSPPK321QAEAVLKTLQ331ELKKLTISEQ341NIQRANLFNK
351-400351LVTELRGLSD361EAVTSLLPQL371IEVSSPITLQ381ALVQCGQPQC391STHILQWLKR
401-450401VHANPLLIDV411VTYLVALIPE421PSAQQLREIF431NMARDQRSRA441TLYALSHAVN
451-500451NYHKTNPTGT461QELLDIANYL471MEQIQDDCTG481DEDYTYLILR491VIGNMGQTME
501-550501QLTPELKSSI511LKCVQSTKPS521LMIQKAAIQA531LRKMEPKDKD541QEVLLQTFLD
551-600551DASPGDKRLA561AYLMLMRSPS571QADINKIVQI581LPWEQNEQVK591NFVASHIANI
601-650601LNSEELDIQD611LKKLVKEALK621ESQLPTVMDF631RKFSRNYQLY641KSVSLPSLDP
651-700651ASAKIEGNLI661FDPNNYLPKE671SMLKTTLTAF681GFASADLIEI691GLEGKGFEPT
701-750701LEALFGKQGF711FPDSVNKALY721WVNGQVPDGV731SKVLVDHFGY741TKDDKHEQDM
751-800751VNGIMLSVEK761LIKDLKSKEV771PEARAYLRIL781GEELGFASLH791DLQLLGKLLL
801-850801MGARTLQGIP811QMIGEVIRKG821SKNDFFLHYI831FMENAFELPT841GAGLQLQISS
851-900851SGVIAPGAKA861GVKLEVANMQ871AELVAKPSVS881VEFVTNMGII891IPDFARSGVQ
901-950901MNTNFFHESG911LEAHVALKAG921KLKFIIPSPK931RPVKLLSGGN941TLHLVSTTKT
951-1000951EVIPPLIENR961QSWSVCKQVF971PGLNYCTSGA981YSNASSTDSA991SYYPLTGDTR
1001-10501001LELELRPTGE1011IEQYSVSATY1021ELQREDRALV1031DTLKFVTQAE1041GAKQTEATMT
1051-11001051FKYNRQSMTL1061SSEVQIPDFD1071VDLGTILRVN1081DESTEGKTSY1091RLTLDIQNKK
1101-11501101ITEVALMGHL1111SCDTKEERKI1121KGVISIPRLQ1131AEARSEILAH1141WSPAKLLLQM
1151-12001151DSSATAYGST1161VSKRVAWHYD1171EEKIEFEWNT1181GTNVDTKKMT1191SNFPVDLSDY
1201-12501201PKSLHMYANR1211LLDHRVPQTD1221MTFRHVGSKL1231IVAMSSWLQK1241ASGSLPYTQT
1251-13001251LQDHLNSLKE1261FNLQNMGLPD1271FHIPENLFLK1281SDGRVKYTLN1291KNSLKIEIPL
1301-13501301PFGGKSSRDL1311KMLETVRTPA1321LHFKSVGFHL1331PSREFQVPTF1341TIPKLYQLQV
1351-14001351PLLGVLDLST1361NVYSNLYNWS1371ASYSGGNTST1381DHFSLRARYH1391MKADSVVDLL
1401-14501401SYNVQGSGET1411TYDHKNTFTL1421SCDGSLRHKF1431LDSNIKFSHV1441EKLGNNPVSK
1451-15001451GLLIFDASSS1461WGPQMSASVH1471LDSKKKQHLF1481VKEVKIDGQF1491RVSSFYAKGT
1501-15501501YGLSCQRDPN1511TGRLNGESNL1521RFNSSYLQGT1531NQITGRYEDG1541TLSLTSTSDL
1551-16001551QSGIIKNTAS1561LKYENYELTL1571KSDTNGKYKN1581FATSNKMDMT1591FSKQNALLRS
1601-16501601EYQADYESLR1611FFSLLSGSLN1621SHGLELNADI1631LGTDKINSGA1641HKATLRIGQD
1651-17001651GISTSATTNL1661KCSLLVLENE1671LNAELGLSGA1681SMKLTTNGRF1691REHNAKFSLD
1701-17501701GKAALTELSL1711GSAYQAMILG1721VDSKNIFNFK1731VSQEGLKLSN1741DMMGSYAEMK
1751-18001751FDHTNSLNIA1761GLSLDFSSKL1771DNIYSSDKFY1781KQTVNLQLQP1791YSLVTTLNSD
1801-18501801LKYNALDLTN1811NGKLRLEPLK1821LHVAGNLKGA1831YQNNEIKHIY1841AISSAALSAS
1851-19001851YKADTVAKVQ1861GVEFSHRLNT1871DIAGLASAID1881MSTNYNSDSL1891HFSNVFRSVM
1901-19501901APFTMTIDAH1911TNGNGKLALW1921GEHTGQLYSK1931FLLKAEPLAF1941TFSHDYKGST
1951-20001951SHHLVSRKSI1961SAALEHKVSA1971LLTPAEQTGT1981WKLKTQFNNN1991EYSQDLDAYN
2001-20502001TKDKIGVELT2011GRTLADLTLL2021DSPIKVPLLL2031SEPINIIDAL2041EMRDAVEKPQ
2051-21002051EFTIVAFVKY2061DKNQDVHSIN2071LPFFETLQEY2081FERNRQTIIV2091VLENVQRNLK
2101-21502101HINIDQFVRK2111YRAALGKLPQ2121QANDYLNSFN2131WERQVSHAKE2141KLTALTKKYR
2151-22002151ITENDIQIAL2161DDAKINFNEK2171LSQLQTYMIQ2181FDQYIKDSYD2191LHDLKIAIAN
2201-22502201IIDEIIEKLK2211SLDEHYHIRV2221NLVKTIHDLH2231LFIENIDFNK2241SGSSTASWIQ
2251-23002251NVDTKYQIRI2261QIQEKLQQLK2271RHIQNIDIQH2281LAGKLKQHIE2291AIDVRVLLDQ
2301-23502301LGTTISFERI2311NDILEHVKHF2321VINLIGDFEV2331AEKINAFRAK2341VHELIERYEV
2351-24002351DQQIQVLMDK2361LVELAHQYKL2371KETIQKLSNV2381LQQVKIKDYF2391EKLVGFIDDA
2401-24502401VKKLNELSFK2411TFIEDVNKFL2421DMLIKKLKSF2431DYHQFVDETN2441DKIREVTQRL
2451-25002451NGEIQALELP2461QKAEALKLFL2471EETKATVAVY2481LESLQDTKIT2491LIINWLQEAL
2501-25502501SSASLAHMKA2511KFRETLEDTR2521DRMYQMDIQQ2531ELQRYLSLVG2541QVYSTLVTYI
2551-26002551SDWWTLAAKN2561LTDFAEQYSI2571QDWAKRMKAL2581VEQGFTVPEI2591KTILGTMPAF
2601-26502601EVSLQALQKA2611TFQTPDFIVP2621LTDLRIPSVQ2631INFKDLKNIK2641IPSRFSTPEF
2651-27002651TILNTFHIPS2661FTIDFVEMKV2671KIIRTIDQML2681NSELQWPVPD2691IYLRDLKVED
2701-27502701IPLARITLPD2711FRLPEIAIPE2721FIIPTLNLND2731FQVPDLHIPE2741FQLPHISHTI
2751-28002751EVPTFGKLYS2761ILKIQSPLFT2771LDANADIGNG2781TTSANEAGIA2791ASITAKGESK
2801-28502801LEVLNFDFQA2811NAQLSNPKIN2821PLALKESVKF2831SSKYLRTEHG2841SEMLFFGNAI
2851-29002851EGKSNTVASL2861HTEKNTLELS2871NGVIVKINNQ2881LTLDSNTKYF2891HKLNIPKLDF
2901-29502901SSQADLRNEI2911KTLLKAGHIA2921WTSSGKGSWK2931WACPRFSDEG2941THESQISFTI
2951-30002951EGPLTSFGLS2961NKINSKHLRV2971NQNLVYESGS2981LNFSKLEIQS2991QVDSQHVGHS
3001-30503001VLTAKGMALF3011GEGKAEFTGR3021HDAHLNGKVI3031GTLKNSLFFS3041AQPFEITAST
3051-31003051NNEGNLKVRF3061PLRLTGKIDF3071LNNYALFLSP3081SAQQASWQVS3091ARFNQYKYNQ
3101-31503101NFSAGNNENI3111MEAHVGINGE3121ANLDFLNIPL3131TIPEMRLPYT3141IITTPPLKDF
3151-32003151SLWEKTGLKE3161FLKTTKQSFD3171LSVKAQYKKN3181KHRHSITNPL3191AVLCEFISQS
3201-32503201IKSFDRHFEK3211NRNNALDFVT3221KSYNETKIKF3231DKYKAEKSHD3241ELPRTFQIPG
3251-33003251YTVPVVNVEV3261SPFTIEMSAF3271GYVFPKAVSM3281PSFSILGSDV3291RVPSYTLILP
3301-33503301SLELPVLHVP3311RNLKLSLPDF3321KELCTISHIF3331IPAMGNITYD3341FSFKSSVITL
3351-34003351NTNAELFNQS3361DIVAHLLSSS3371SSVIDALQYK3381LEGTTRLTRK3391RGLKLATALS
3401-34503401LSNKFVEGSH3411NSTVSLTTKN3421MEVSVATTTK3431AQIPILRMNF3441KQELNGNTKS
3451-35003451KPTVSSSMEF3461KYDFNSSMLY3471STAKGAVDHK3481LSLESLTSYF3491SIESSTKGDV
3501-35503501KGSVLSREYS3511GTIASEANTY3521LNSKSTRSSV3531KLQGTSKIDD3541IWNLEVKENF
3551-36003551AGEATLQRIY3561SLWEHSTKNH3571LQLEGLFFTN3581GEHTSKATLE3591LSPWQMSALV
3601-36503601QVHASQPSSF3611HDFPDLGQEV3621ALNANTKNQK3631IRWKNEVRIH3641SGSFQSQVEL
3651-37003651SNDQEKAHLD3661IAGSLEGHLR3671FLKNIILPVY3681DKSLWDFLKL3691DVTTSIGRRQ
3701-37503701HLRVSTAFVY3711TKNPNGYSFS3721IPVKVLADKF3731IIPGLKLNDL3741NSVLVMPTFH
3751-38003751VPFTDLQVPS3761CKLDFREIQI3771YKKLRTSSFA3781LNLPTLPEVK3791FPEVDVLTKY
3801-38503801SQPEDSLIPF3811FEITVPESQL3821TVSQFTLPKS3831VSDGIAALDL3841NAVANKIADF
3851-39003851ELPTIIVPEQ3861TIEIPSIKFS3871VPAGIVIPSF3881QALTARFEVD3891SPVYNATWSA
3901-39503901SLKNKADYVE3911TVLDSTCSST3921VQFLEYELNV3931LGTHKIEDGT3941LASKTKGTFA
3951-40003951HRDFSAEYEE3961DGKYEGLQEW3971EGKAHLNIKS3981PAFTDLHLRY3991QKDKKGISTS
4001-40504001AASPAVGTVG4011MDMDEDDDFS4021KWNFYYSPQS4031SPDKKLTIFK4041TELRVRESDE
4051-41004051ETQIKVNWEE4061EAASGLLTSL4071KDNVPKATGV4081LYDYVNKYHW4091EHTGLTLREV
4101-41504101SSKLRRNLQN4111NAEWVYQGAI4121RQIDDIDVRF4131QKAASGTTGT4141YQEWKDKAQN
4151-42004151LYQELLTQEG4161QASFQGLKDN4171VFDGLVRVTQ4181EFHMKVKHLI4191DSLIDFLNFP
4201-42504201RFQFPGKPGI4211YTREELCTMF4221IREVGTVLSQ4231VYSKVHNGSE4241ILFSYFQDLV
4251-43004251ITLPFELRKH4261KLIDVISMYR4271ELLKDLSKEA4281QEVFKAIQSL4291KTTEVLRNLQ
4301-43504301DLLQFIFQLI4311EDNIKQLKEM4321KFTYLINYIQ4331DEINTIFSDY4341IPYVFKLLKE
4351-44004351NLCLNLHKFN4361EFIQNELQEA4371SQELQQIHQY4381IMALREEYFD4391PSIVGWTVKY
4401-44504401YELEEKIVSL4411IKNLLVALKD4421FHSEYIVSAS4431NFTSQLSSQV4441EQFLHRNIQE
4451-45004451YLSILTDPDG4461KGKEKIAELS4471ATAQEIIKSQ4481AIATKKIISD4491YHQQFRYKLQ
4501-45504501DFSDQLSDYY4511EKFIAESKRL4521IDLSIQNYHT4531FLIYITELLK4541KLQSTTVMNP
4551-45634551YMKLAPGELT4561IIL
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
39 Prediction (Medium) - -
97 Prediction (Low) - -
212 Prediction (Low) - -
245 Experimental Prediction (Low) - 37611173
261 Prediction (Low) - -
513 Prediction (Medium) - -
976 Prediction (Low) - -
1112 DBPTM SWISSPALM Prediction (Medium) - -
1422 Prediction (Low) - -
1505 Prediction (High) - -
1662 Prediction (Medium) - -
3324 Prediction (Low) - -
4217 Prediction (Low) - -
4353 Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
186 C → F 0.001887 SNP Missense Mutation UCEC
219 R → C 0.001887 SNP Missense Mutation UCEC
233 R → C 0.002427 SNP Missense Mutation BLCA
297 R → C 0.001887 SNP Missense Mutation UCEC
437 R → C 0.001969 SNP Missense Mutation LGG
452 Y → C 0.001887 SNP Missense Mutation UCEC
724 G → C 0.002033 SNP Missense Mutation LUSC
804 R → C 0.002033 SNP Missense Mutation LUSC
924 F → C 0.001887 SNP Missense Mutation UCEC
993 Y → C 0.001969 SNP Missense Mutation HNSC
1128 R → C 0.001969 SNP Missense Mutation LGG
1169 Y → C 0.001887 SNP Missense Mutation UCEC
1319 P → Cfs*41 0.002288 INS Frame Shift Ins STAD
1332 S → C 0.002747 SNP Missense Mutation LIHC
1388 R → C 0.008565 SNP Missense Mutation SKCM
1451 G → C 0.002506 SNP Missense Mutation COAD
1505 C → F 0.001969 SNP Missense Mutation HNSC
1512 G → C 0.001764 SNP Missense Mutation LUAD
2031 S → C 0.001764 SNP Missense Mutation LUAD
2057 F → C 0.002288 SNP Missense Mutation STAD
2058 V → _K2059insIMRESKCQRFCFQQEFTIVAFV 0.001887 INS In Frame Ins UCEC
2073 F → C 0.001887 SNP Missense Mutation UCEC
2181 F → C 0.002506 SNP Missense Mutation COAD
2181 F → C 0.001887 SNP Missense Mutation UCEC
2219 R → C 0.002141 SNP Missense Mutation SKCM
2432 Y → C 0.001887 SNP Missense Mutation UCEC
2573 W → C 0.001764 SNP Missense Mutation LUAD
2617 F → C 0.003774 SNP Missense Mutation UCEC
2650 F → C 0.001887 SNP Missense Mutation UCEC
2673 I → _R2674insCPTIFQDILKSH 0.002545 INS In Frame Ins GBM
2834 Y → C 0.001887 SNP Missense Mutation UCEC
2902 S → C 0.002747 SNP Missense Mutation LIHC
2980 S → C 0.005435 SNP Missense Mutation ESCA
3006 G → C 0.002506 SNP Missense Mutation COAD
3058 V → _R3059insLC 0.001887 INS In Frame Ins UCEC
3059 R → C 0.006424 SNP Missense Mutation SKCM
3136 R → C 0.002506 SNP Missense Mutation COAD
3136 R → C 0.002141 SNP Missense Mutation SKCM
3194 C → F 0.001969 SNP Missense Mutation HNSC
3233 Y → C 0.001969 SNP Missense Mutation HNSC
3251 Y → C 0.001887 SNP Missense Mutation UCEC
3454 V → Cfs*8 0.002747 INS Frame Shift Ins LIHC
3471 S → C 0.002294 SNP Missense Mutation OV
3495 S → C 0.002427 SNP Missense Mutation BLCA
3502 G → C 0.002976 SNP Missense Mutation KIRC
3558 R → C 0.007299 SNP Missense Mutation READ
3703 R → C 0.002141 SNP Missense Mutation SKCM
3958 Y → C 0.003559 SNP Missense Mutation KIRP
4130 F → C 0.002506 SNP Missense Mutation COAD
4322 F → C 0.002506 SNP Missense Mutation COAD
4345 F → C 0.003774 SNP Missense Mutation UCEC
4385 R → C 0.001969 SNP Missense Mutation LGG
4513 F → C 0.001887 SNP Missense Mutation UCEC