Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P06795 | Abcb1b | ATP-dependent translocase ABCB1 (ATP-binding cassette … | Mus musculus (Mouse) | 1276 aa |
Protein Details: P06795 (Abcb1b)
Protein Information
| Accession | P06795 |
|---|---|
| Protein Names | ATP-dependent translocase ABCB1 (ATP-binding cassette sub-family B member 1B) (Multidrug resistance protein 1B) (EC 7.6.2.2) (P-glycoprotein 1) (Phospholipid transporter ABCB1) (EC 7.6.2.1) (CD antigen CD243) |
| Gene Symbol | Abcb1b |
| Organism | Mus musculus (Mouse) |
| Length | 1276 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEFEENLKGR11ADKNFSKMGK21KSKKEKKEKK31PAVGVFGMFR41YADWLDKLCM
51-10051ILGTLAAIIH61GTLLPLLMLV71FGNMTDSFTK81AEASILPSIT91NQSGPNSTLI
101-150101ISNSSLEEEM111AIYAYYYTGI121GAGVLIVAYI131QVSLWCLAAG141RQIHKIRQKF
151-200151FHAIMNQEIG161WFDVHDVGEL171NTRLTDDVSK181INDGIGDKIG191MFFQSITTFL
201-250201AGFIIGFISG211WKLTLVILAV221SPLIGLSSAL231WAKVLTSFTN241KELQAYAKAG
251-300251AVAEEVLAAI261RTVIAFGGQQ271KELERYNKNL281EEAKNVGIKK291AITASISIGI
301-350301AYLLVYASYA311LAFWYGTSLV321LSNEYSIGEV331LTVFFSILLG341TFSIGHLAPN
351-400351IEAFANARGA361AFEIFKIIDN371EPSIDSFSTK381GYKPDSIMGN391LEFKNVHFNY
401-450401PSRSEVQILK411GLNLKVKSGQ421TVALVGNSGC431GKSTTVQLMQ441RLYDPLEGVV
451-500451SIDGQDIRTI461NVRYLREIIG471VVSQEPVLFA481TTIAENIRYG491REDVTMDEIE
501-550501KAVKEANAYD511FIMKLPHQFD521TLVGERGAQL531SGGQKQRIAI541ARALVRNPKI
551-600551LLLDEATSAL561DTESEAVVQA571ALDKAREGRT581TIVIAHRLST591VRNADVIAGF
601-650601DGGVIVEQGN611HDELMREKGI621YFKLVMTQTR631GNEIEPGNNA641YGSQSDTDAS
651-700651ELTSEESKSP661LIRRSIYRSV671HRKQDQERRL681SMKEAVDEDV691PLVSFWRILN
701-750701LNLSEWPYLL711VGVLCAVING721CIQPVFAIVF731SRIVGVFSRD741DDHETKRQNC
751-800751NLFSLFFLVM761GLISFVTYFF771QGFTFGKAGE781ILTKRVRYMV791FKSMLRQDIS
801-850801WFDDHKNSTG811SLTTRLASDA821SSVKGAMGAR831LAVVTQNVAN841LGTGVILSLV
851-900851YGWQLTLLLV861VIIPLIVLGG871IIEMKLLSGQ881ALKDKKQLEI891SGKIATEAIE
901-950901NFRTIVSLTR911EQKFETMYAQ921SLQVPYRNAM931KKAHVFGITF941SFTQAMMYFS
951-1000951YAACFRFGAY961LVAQQLMTFE971NVMLVFSAVV981FGAMAAGNTS991SFAPDYAKAK
1001-10501001VSASHIIRII1011EKTPEIDSYS1021TEGLKPTLLE1031GNVKFNGVQF1041NYPTRPNIPV
1051-11001051LQGLSLEVKK1061GQTLALVGSS1071GCGKSTVVQL1081LERFYDPMAG1091SVFLDGKEIK
1101-11501101QLNVQWLRAH1111LGIVSQEPIL1121FDCSIAENIA1131YGDNSRAVSH1141EEIVRAAKEA
1151-12001151NIHQFIDSLP1161DKYNTRVGDK1171GTQLSGGQKQ1181RIAIARALVR1191QPHILLLDEA
1201-12501201TSALDTESEK1211VVQEALDKAR1221EGRTCIVIAH1231RLSTIQNADL1241IVVIENGKVK
1251-12761251EHGTHQQLLA1261QKGIYFSMVQ1271AGAKRS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 49 | ABC transporter type 1, transmembrane domain superfamily | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.90
|
|
| 136 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.80
|
|
| 430 | SWISSPALM DBPTM CYSMODDB | ABC transporter |
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 715 | - | - | - |
Deep-Palm: 0.84
|
|
| 721 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.89
|
|
| 750 | - | - | - |
Deep-Palm: 0.51
|
|
| 954 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.05
|
|
| 1072 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 1123 | - | - | - |
Deep-Palm: 0.95
|
|
| 1225 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
1
Liver
Specificity: 0.333
1/1 (100.0%)
1
Raw 264.7
Specificity: 0.333
1/1 (100.0%)
1
Testis
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.