Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P06837 | Gap43 | Neuromodulin (Axonal membrane protein GAP-43) … | Mus musculus (Mouse) | 227 aa |
Protein Details: P06837 (Gap43)
Protein Information
| Accession | P06837 |
|---|---|
| Protein Names | Neuromodulin (Axonal membrane protein GAP-43) (Calmodulin-binding protein P-57) (Growth-associated protein 43) |
| Gene Symbol | Gap43 |
| Organism | Mus musculus (Mouse) |
| Length | 227 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 31772009 34200797 35358180 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLCCMRRTKQ11VEKNDEDQKI21EQDGVKPEDK31AHKAATKIQA41SFRGHITRKK
51-10051LKGEKKGDAP61AAEAEAKEKD71DAPVADGVEK81KEGDGSATTD91AAPATSPKAE
101-150101EPSKAGDAPS111EEKKGEGDAA121PSEEKAGSAE131TESAAKATTD141NSPSSKAEDG
151-200151PAKEEPKQAD161VPAAVTDAAA171TTPAAEDAAT181KAAQPPTETA191ESSQAEEEKD
201-227201AVDEAKPKES211ARQDEGKEDP221EADQEHA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | SWISSPALM DBPTM CYSMODDB | Gap junction protein N-terminal region Neuromodulin, palmitoylation site Neuromodulin (GAP-43) Neuromodulin gap junction N-terminal |
Brain
(34200797)
Forebrain
(28680068)
| - |
GPS-Palm: 0.98
Deep-Palm: 0.02
|
| 4 | SWISSPALM DBPTM CYSMODDB | Gap junction protein N-terminal region Neuromodulin, palmitoylation site Neuromodulin (GAP-43) Neuromodulin gap junction N-terminal |
Forebrain
(28680068)
| - |
GPS-Palm: 0.98
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.833
5
Brain
Specificity: 0.833
5/5 (100.0%)
1
NSC
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.