Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P06909 | Cfh | Complement factor H (Protein beta-1-H) | Mus musculus (Mouse) | 1234 aa |
Protein Details: P06909 (Cfh)
Protein Information
| Accession | P06909 |
|---|---|
| Protein Names | Complement factor H (Protein beta-1-H) |
| Gene Symbol | Cfh |
| Organism | Mus musculus (Mouse) |
| Length | 1234 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRLSARIIWL11ILWTVCAAED21CKGPPPRENS31EILSGSWSEQ41LYPEGTQATY
51-10051KCRPGYRTLG61TIVKVCKNGK71WVASNPSRIC81RKKPCGHPGD91TPFGSFRLAV
101-150101GSQFEFGAKV111VYTCDDGYQL121LGEIDYRECG131ADGWINDIPL141CEVVKCLPVT
151-200151ELENGRIVSG161AAETDQEYYF171GQVVRFECNS181GFKIEGHKEI191HCSENGLWSN
201-250201EKPRCVEILC211TPPRVENGDG221INVKPVYKEN231ERYHYKCKHG241YVPKERGDAV
251-300251CTGSGWSSQP261FCEEKRCSPP271YILNGIYTPH281RIIHRSDDEI291RYECNYGFYP
301-350301VTGSTVSKCT311PTGWIPVPRC321TLKPCEFPQF331KYGRLYYEES341LRPNFPVSIG
351-400351NKYSYKCDNG361FSPPSGYSWD371YLRCTAQGWE381PEVPCVRKCV391FHYVENGDSA
401-450401YWEKVYVQGQ411SLKVQCYNGY421SLQNGQDTMT431CTENGWSPPP441KCIRIKTCSA
451-500451SDIHIDNGFL461SESSSIYALN471RETSYRCKQG481YVTNTGEISG491SITCLQNGWS
501-550501PQPSCIKSCD511MPVFENSITK521NTRTWFKLND531KLDYECLVGF541ENEYKHTKGS
551-600551ITCTYYGWSD561TPSCYERECS571VPTLDRKLVV581SPRKEKYRVG591DLLEFSCHSG
601-650601HRVGPDSVQC611YHFGWSPGFP621TCKGQVASCA631PPLEILNGEI641NGAKKVEYSH
651-700651GEVVKYDCKP661RFLLKGPNKI671QCVDGNWTTL681PVCIEEERTC691GDIPELEHGS
701-750701AKCSVPPYHH711GDSVEFICEE721NFTMIGHGSV731SCISGKWTQL741PKCVATDQLE
751-800751KCRVLKSTGI761EAIKPKLTEF771THNSTMDYKC781RDKQEYERSI791CINGKWDPEP
801-850801NCTSKTSCPP811PPQIPNTQVI821ETTVKYLDGE831KLSVLCQDNY841LTQDSEEMVC
851-900851KDGRWQSLPR861CIEKIPCSQP871PTIEHGSINL881PRSSEERRDS891IESSSHEHGT
901-950901TFSYVCDDGF911RIPEENRITC921YMGKWSTPPR931CVGLPCGPPP941SIPLGTVSLE
951-1000951LESYQHGEEV961TYHCSTGFGI971DGPAFIICEG981GKWSDPPKCI991KTDCDVLPTV
1001-10501001KNAIIRGKSK1011KSYRTGEQVT1021FRCQSPYQMN1031GSDTVTCVNS1041RWIGQPVCKD
1051-11001051NSCVDPPHVP1061NATIVTRTKN1071KYLHGDRVRY1081ECNKPLELFG1091QVEVMCENGI
1101-11501101WTEKPKCRDS1111TGKCGPPPPI1121DNGDITSLSL1131PVYEPLSSVE1141YQCQKYYLLK
1151-12001151GKKTITCRNG1161KWSEPPTCLH1171ACVIPENIME1181SHNIILKWRH1191TEKIYSHSGE
1201-12341201DIEFGCKYGY1211YKARDSPPFR1221TKCINGTINY1231PTCV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.77
|
|
| 21 | - | - | - |
Deep-Palm: 0.58
|
|
| 52 | - | - | - |
Deep-Palm: 0.39
|
|
| 66 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.54
|
|
| 80 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.13
|
|
| 85 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.70
|
| 114 | - | - | - |
Deep-Palm: 0.36
|
|
| 129 | - | - | - |
Deep-Palm: 0.08
|
|
| 141 | - | - | - |
Deep-Palm: 0.50
|
|
| 146 | - | - | - |
Deep-Palm: 0.91
|
|
| 178 | - | - | - |
Deep-Palm: 0.12
|
|
| 192 | - | - | - |
Deep-Palm: 0.09
|
|
| 205 | - |
brain
(39008777)
| - |
Deep-Palm: 0.10
|
|
| 210 | - |
brain
(39008777)
| - |
Deep-Palm: 0.61
|
|
| 237 | - | - | - |
Deep-Palm: 0.26
|
|
| 251 | - | - | - |
Deep-Palm: 0.21
|
|
| 262 | - | - | - |
Deep-Palm: 0.04
|
|
| 267 | SWISSPALM DBPTM CYSMODDB | - | - | - |
Deep-Palm: 0.22
|
| 294 | - | - | - |
Deep-Palm: 0.04
|
|
| 309 | - |
brain
(39008777)
| - |
Deep-Palm: 0.08
|
|
| 320 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.55
|
| 325 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.68
|
|
| 357 | - | - | - |
Deep-Palm: 0.03
|
|
| 374 | - | - | - |
Deep-Palm: 0.15
|
|
| 385 | - | - | - |
Deep-Palm: 0.12
|
|
| 389 | - | - | - |
Deep-Palm: 0.10
|
|
| 416 | - | - | - |
Deep-Palm: 0.07
|
|
| 431 | - | - | - |
Deep-Palm: 0.04
|
|
| 442 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.03
|
|
| 448 | - | - | - |
Deep-Palm: 0.26
|
|
| 477 | - | - | - |
Deep-Palm: 0.42
|
|
| 494 | - | - | - |
Deep-Palm: 0.10
|
|
| 505 | - | - | - |
Deep-Palm: 0.03
|
|
| 509 | - | - | - |
Deep-Palm: 0.03
|
|
| 536 | - | - | - |
Deep-Palm: 0.30
|
|
| 553 | - | - | - |
Deep-Palm: 0.03
|
|
| 564 | - | - | - |
Deep-Palm: 0.14
|
|
| 569 | - | - | - |
Deep-Palm: 0.80
|
|
| 597 | SWISSPALM DBPTM CYSMODDB | Sushi repeat (SCR repeat) | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.88
|
| 610 | - | - | - |
Deep-Palm: 0.05
|
|
| 622 | - | - | - |
Deep-Palm: 0.11
|
|
| 629 | - | - | - |
Deep-Palm: 0.82
|
|
| 658 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.83
|
|
| 672 | - | - | - |
Deep-Palm: 0.58
|
|
| 683 | - | - | - |
Deep-Palm: 0.14
|
|
| 690 | - | - | - |
Deep-Palm: 0.54
|
|
| 703 | - | - | - |
Deep-Palm: 0.16
|
|
| 718 | - | - | - |
Deep-Palm: 0.04
|
|
| 732 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.10
|
|
| 743 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.57
|
|
| 752 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.91
|
|
| 780 | - | - | - |
Deep-Palm: 0.05
|
|
| 791 | - | - | - |
Deep-Palm: 0.03
|
|
| 802 | - | - | - |
Deep-Palm: 0.02
|
|
| 808 | - | - | - |
Deep-Palm: 0.04
|
|
| 836 | - | - | - |
Deep-Palm: 0.69
|
|
| 850 | - | - | - |
Deep-Palm: 0.11
|
|
| 861 | - | - | - |
Deep-Palm: 0.08
|
|
| 867 | - | - | - |
Deep-Palm: 0.48
|
|
| 906 | - | - | - |
Deep-Palm: 0.05
|
|
| 920 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.08
|
|
| 931 | - | - | - |
Deep-Palm: 0.14
|
|
| 936 | - | - | - |
Deep-Palm: 0.95
|
|
| 964 | - | - | - |
Deep-Palm: 0.15
|
|
| 978 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.09
|
|
| 989 | - | - | - |
Deep-Palm: 0.07
|
|
| 994 | - | - | - |
Deep-Palm: 0.29
|
|
| 1023 | - | - | - |
Deep-Palm: 0.15
|
|
| 1037 | - | - | - |
Deep-Palm: 0.02
|
|
| 1048 | - |
brain
(39008777)
| - |
Deep-Palm: 0.02
|
|
| 1053 | - | - | - |
Deep-Palm: 0.07
|
|
| 1082 | - | - | - |
Deep-Palm: 0.43
|
|
| 1096 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.15
|
|
| 1107 | - | - | - |
Deep-Palm: 0.03
|
|
| 1114 | - | - | - |
Deep-Palm: 0.12
|
|
| 1143 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.71
|
|
| 1157 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.16
|
|
| 1168 | - | - | - |
Deep-Palm: 0.04
|
|
| 1172 | - | - | - |
Deep-Palm: 0.06
|
|
| 1206 | - |
brain
(39008777)
| - |
Deep-Palm: 0.38
|
|
| 1223 | - | - | - |
Deep-Palm: 0.02
|
|
| 1233 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.