Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P08228 | Sod1 | Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) … | Mus musculus (Mouse) | 154 aa |
Protein Details: P08228 (Sod1)
Protein Information
| Accession | P08228 |
|---|---|
| Protein Names | Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) (EC 1.8.-.-) (Hydrogen sulfide oxidase) |
| Gene Symbol | Sod1 |
| Organism | Mus musculus (Mouse) |
| Length | 154 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAMKAVCVLK11GDGPVQGTIH21FEQKASGEPV31VLSGQITGLT41EGQHGFHVHQ
51-10051YGDNTQGCTS61AGPHFNPHSK71KHGGPADEER81HVGDLGNVTA91GKDGVANVSI
101-150101EDRVISLSGE111HSIIGRTMVV121HEKQDDLGKG131GNEESTKTGN141AGSRLACGVI
151-154151GIAQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | SWISSPALM DBPTM CYSMODDB | Superoxide dismutase-like, copper/zinc binding domain superfamily |
liver
(26165157)
brain
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.03
|
| 58 | Copper/zinc superoxide dismutase (SODC) |
Brain
(34200797)
| - |
Deep-Palm: 0.09
|
|
| 147 | Copper/zinc superoxide dismutase (SODC) |
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.11
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.214
3/3 (100.0%)
2
Brain
Specificity: 0.143
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.643
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.