Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P09326 | CD48 | CD48 antigen (B-lymphocyte activation marker … | Homo sapiens (Human) | 243 aa |
Protein Details: P09326 (CD48)
Protein Information
| Accession | P09326 |
|---|---|
| Protein Names | CD48 antigen (B-lymphocyte activation marker BLAST-1) (BCM1 surface antigen) (Leukocyte antigen MEM-102) (SLAM family member 2) (SLAMF2) (Signaling lymphocytic activation molecule 2) (TCT.1) (CD antigen CD48) |
| Gene Symbol | CD48 |
| Organism | Homo sapiens (Human) |
| Length | 243 aa |
| Isoforms | No isoforms |
| Related PMIDs | 25914232 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MCSRGWDSCL11ALELLLLPLS21LLVTSIQGHL31VHMTVVSGSN41VTLNISESLP
51-10051ENYKQLTWFY61TFDQKIVEWD71SRKSKYFESK81FKGRVRLDPQ91SGALYISKVQ
101-150101KEDNSTYIMR111VLKKTGNEQE121WKIKLQVLDP131VPKPVIKIEK141IEDMDDNCYL
151-200151KLSCVIPGES161VNYTWYGDKR171PFPKELQNSV181LETTLMPHNY191SRCYTCQVSN
201-243201SVSSKNGTVC211LSPPCTLARS221FGVEWIASWL231VVTVPTILGL241LLT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 2 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.04
|
|
| 9 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.23
|
|
| 148 | - | - | - |
Deep-Palm: 0.36
|
|
| 154 | - | - | - |
Deep-Palm: 0.09
|
|
| 193 | - | - | - |
Deep-Palm: 0.27
|
|
| 196 | - | - | - |
Deep-Palm: 0.24
|
|
| 210 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.91
|
|
| 215 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
CEM 174 cell
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 193 | C → Y | 0.002545 | SNP | Missense Mutation | GBM |
| 194 | Y → C | 0.005435 | SNP | Missense Mutation | ESCA |
| ? | ? → ? | 0.002020 | SNP | Missense Mutation | PRAD |