Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P09411 | Pgk1 | Phosphoglycerate kinase 1 (EC 2.7.11.1) … | Mus musculus (Mouse) | 417 aa |
Protein Details: P09411 (Pgk1)
Protein Information
| Accession | P09411 |
|---|---|
| Protein Names | Phosphoglycerate kinase 1 (EC 2.7.11.1) (EC 2.7.2.3) |
| Gene Symbol | Pgk1 |
| Organism | Mus musculus (Mouse) |
| Length | 417 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSLSNKLTLD11KLDVKGKRVV21MRVDFNVPMK31NNQITNNQRI41KAAVPSIKFC
51-10051LDNGAKSVVL61MSHLGRPDGV71PMPDKYSLEP81VAAELKSLLG91KDVLFLKDCV
101-150101GPEVENACAN111PAAGTVILLE121NLRFHVEEEG131KGKDASGNKV141KAEPAKIDAF
151-200151RASLSKLGDV161YVNDAFGTAH171RAHSSMVGVN181LPQKAGGFLM191KKELNYFAKA
201-250201LESPERPFLA211ILGGAKVADK221IQLINNMLDK231VNEMIIGGGM241AFTFLKVLNN
251-300251MEIGTSLYDE261EGAKIVKDLM271SKAEKNGVKI281TLPVDFVTAD291KFDENAKTGQ
301-350301ATVASGIPAG311WMGLDCGTES321SKKYAEAVGR331AKQIVWNGPV341GVFEWEAFAR
351-400351GTKSLMDEVV361KATSRGCITI371IGGGDTATCC381AKWNTEDKVS391HVSTGGGASL
401-417401ELLEGKVLPG411VDALSNV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 50 | SWISSPALM DBPTM CYSMODDB | Phosphoglycerate kinase Phosphoglycerate kinase, N-terminal |
liver
(26165157)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.96
|
| 99 | SWISSPALM DBPTM CYSMODDB | Phosphoglycerate kinase |
Liver
(28526873)
|
Liver
(34884899)
Brain
(35358180)
|
GPS-Palm: 0.81
Deep-Palm: 0.98
|
| 108 | SWISSPALM DBPTM CYSMODDB | Phosphoglycerate kinase |
Liver
(28526873)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.96
|
| 316 | SWISSPALM DBPTM CYSMODDB | Phosphoglycerate kinase |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.97
|
| 367 | Phosphoglycerate kinase |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.87
Deep-Palm: 0.91
|
|
| 379 | Phosphoglycerate kinase |
Brain
(34200797)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.76
Deep-Palm: 0.54
|
|
| 380 | Phosphoglycerate kinase |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.80
Deep-Palm: 0.76
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.455
5
Liver
Specificity: 0.125
5/5 (100.0%)
4
Brain
Specificity: 0.100
4/4 (100.0%)
2
Testis
Specificity: 0.050
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
29
Brain tissue (Mass)
Specificity: 0.725
29/56 (51.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.