Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P09564 | CD7 | T-cell antigen CD7 (GP40) (T-cell … | Homo sapiens (Human) | 240 aa |
Protein Details: P09564 (CD7)
Protein Information
| Accession | P09564 |
|---|---|
| Protein Names | T-cell antigen CD7 (GP40) (T-cell leukemia antigen) (T-cell surface antigen Leu-9) (TP41) (CD antigen CD7) |
| Gene Symbol | CD7 |
| Organism | Homo sapiens (Human) |
| Length | 240 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26111759 32651440 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGPPRLLLL11PLLLALARGL21PGALAAQEVQ31QSPHCTTVPV41GASVNITCST
51-10051SGGLRGIYLR61QLGPQPQDII71YYEDGVVPTT81DRRFRGRIDF91SGSQDNLTIT
101-150101MHRLQLSDTG111TYTCQAITEV121NVYGSGTLVL131VTEEQSQGWH141RCSDAPPRAS
151-200151ALPAPPTGSA161LPDPQTASAL171PDPPAASALP181AALAVISFLL191GLGLGVACVL
201-240201ARTQIKKLCS211WRDKNSAACV221VYEDMSHSRC231NTLSSPNQYQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 35 | - | - | - |
Deep-Palm: 0.56
|
|
| 48 | T-cell antigen CD7 | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.71
|
|
| 114 | - | - | - |
Deep-Palm: 0.26
|
|
| 142 | - | - | - |
Deep-Palm: 0.89
|
|
| 198 | DBPTM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
| 209 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.86
|
|
| 219 | - | - | - |
Deep-Palm: 0.23
|
|
| 230 | - | - | - |
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Jurkat T cell
Specificity: 0.556
5/5 (100.0%)
4
Primary T cell
Specificity: 0.444
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 48 | C → C | 0.001764 | SNP | Silent | LUAD |
| 55 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 103 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 124 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |