Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P0C8K7 | Smim1 | Small integral membrane protein 1 | Mus musculus (Mouse) | 78 aa |
Protein Details: P0C8K7 (Smim1)
Protein Information
| Accession | P0C8K7 |
|---|---|
| Protein Names | Small integral membrane protein 1 |
| Gene Symbol | Smim1 |
| Organism | Mus musculus (Mouse) |
| Length | 78 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQSQESGVHY11SRWDSSSRDE21VSMTAMSSSE31EASCYRRISQ41KLCSGKLGIA
51-7851MKVLGGVALF61WIIFILGYIT71GYYVHKCK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 34 | SWISSPALM DBPTM CYSMODDB | Small integral membrane protein 1 Domain of unknown function (DUF4731) |
Forebrain
(28680068)
| - |
Deep-Palm: 0.91
|
| 43 | Small integral membrane protein 1 | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 77 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.