Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P12970 | Rpl7a | Large ribosomal subunit protein eL8 … | Mus musculus (Mouse) | 266 aa |
Protein Details: P12970 (Rpl7a)
Protein Information
| Accession | P12970 |
|---|---|
| Protein Names | Large ribosomal subunit protein eL8 (60S ribosomal protein L7a) (Surfeit locus protein 3) |
| Gene Symbol | Rpl7a |
| Organism | Mus musculus (Mouse) |
| Length | 266 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPKGKKAKGK11KVAPAPAVVK21KQEAKKVVNP31LFEKRPKNFG41IGQDIQPKRD
51-10051LTRFVKWPRY61IRLQRQRAIL71YKRLKVPPAI81NQFTQALDRQ91TATQLLKLAH
101-150101KYRPETKQEK111KQRLLARAEK121KAAGKGDVPT131KRPPVLRAGV141NTVTTLVENK
151-200151KAQLVVIAHD161VDPIELVVFL171PALCRKMGVP181YCIIKGKARL191GHLVHRKTCT
201-250201TVAFTQVNSE211DKGALAKLVE221AIRTNYNDRY231DEIRRHWGGN241VLGPKSVARI
251-266251AKLEKAKAKE261LATKLG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 174 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.74
Deep-Palm: 0.91
|
|
| 182 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 199 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.81
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.214
6/6 (100.0%)
2
Brain
Specificity: 0.071
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
20
Brain tissue (Mass)
Specificity: 0.714
20/56 (35.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.