Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P13516 | Scd1 | Acyl-CoA desaturase 1 (EC 1.14.19.1) … | Mus musculus (Mouse) | 355 aa |
Protein Details: P13516 (Scd1)
Protein Information
| Accession | P13516 |
|---|---|
| Protein Names | Acyl-CoA desaturase 1 (EC 1.14.19.1) (Delta(9)-desaturase 1) (Delta-9 desaturase 1) (Fatty acid desaturase 1) (Stearoyl-CoA desaturase 1) |
| Gene Symbol | Scd1 |
| Organism | Mus musculus (Mouse) |
| Length | 355 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPAHMLQEIS11SSYTTTTTIT21APPSGNEREK31VKTVPLHLEE41DIRPEMKEDI
51-10051HDPTYQDEEG61PPPKLEYVWR71NIILMVLLHL81GGLYGIILVP91SCKLYTCLFG
101-150101IFYYMTSALG111ITAGAHRLWS121HRTYKARLPL131RIFLIIANTM141AFQNDVYEWA
151-200151RDHRAHHKFS161ETHADPHNSR171RGFFFSHVGW181LLVRKHPAVK191EKGGKLDMSD
201-250201LKAEKLVMFQ211RRYYKPGLLL221MCFILPTLVP231WYCWGETFVN241SLFVSTFLRY
251-300251TLVLNATWLV261NSAAHLYGYR271PYDKNIQSRE281NILVSLGAVG291EGFHNYHHTF
301-350301PFDYSASEYR311WHINFTTFFI321DCMAALGLAY331DRKKVSKATV341LARIKRTGDG
351-355351SHKSS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 92 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.49
|
|
| 97 | - | - | - |
Deep-Palm: 0.46
|
|
| 222 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.36
|
|
| 233 | - | - | - |
Deep-Palm: 0.13
|
|
| 322 | - | - | - |
Deep-Palm: 0.21
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.800
4/4 (100.0%)
1
Raw 264.7
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.