Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P13569 | CFTR | Cystic fibrosis transmembrane conductance regulator … | Homo sapiens (Human) | 1480 aa |
Protein Details: P13569 (CFTR)
Protein Information
| Accession | P13569 |
|---|---|
| Protein Names | Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 5.6.1.6) (cAMP-dependent chloride channel) |
| Gene Symbol | CFTR |
| Organism | Homo sapiens (Human) |
| Length | 1480 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQRSPLEKAS11VVSKLFFSWT21RPILRKGYRQ31RLELSDIYQI41PSVDSADNLS
51-10051EKLEREWDRE61LASKKNPKLI71NALRRCFFWR81FMFYGIFLYL91GEVTKAVQPL
101-150101LLGRIIASYD111PDNKEERSIA121IYLGIGLCLL131FIVRTLLLHP141AIFGLHHIGM
151-200151QMRIAMFSLI161YKKTLKLSSR171VLDKISIGQL181VSLLSNNLNK191FDEGLALAHF
201-250201VWIAPLQVAL211LMGLIWELLQ221ASAFCGLGFL231IVLALFQAGL241GRMMMKYRDQ
251-300251RAGKISERLV261ITSEMIENIQ271SVKAYCWEEA281MEKMIENLRQ291TELKLTRKAA
301-350301YVRYFNSSAF311FFSGFFVVFL321SVLPYALIKG331IILRKIFTTI341SFCIVLRMAV
351-400351TRQFPWAVQT361WYDSLGAINK371IQDFLQKQEY381KTLEYNLTTT391EVVMENVTAF
401-450401WEEGFGELFE411KAKQNNNNRK421TSNGDDSLFF431SNFSLLGTPV441LKDINFKIER
451-500451GQLLAVAGST461GAGKTSLLMV471IMGELEPSEG481KIKHSGRISF491CSQFSWIMPG
501-550501TIKENIIFGV511SYDEYRYRSV521IKACQLEEDI531SKFAEKDNIV541LGEGGITLSG
551-600551GQRARISLAR561AVYKDADLYL571LDSPFGYLDV581LTEKEIFESC591VCKLMANKTR
601-650601ILVTSKMEHL611KKADKILILH621EGSSYFYGTF631SELQNLQPDF641SSKLMGCDSF
651-700651DQFSAERRNS661ILTETLHRFS671LEGDAPVSWT681ETKKQSFKQT691GEFGEKRKNS
701-750701ILNPINSIRK711FSIVQKTPLQ721MNGIEEDSDE731PLERRLSLVP741DSEQGEAILP
751-800751RISVISTGPT761LQARRRQSVL771NLMTHSVNQG781QNIHRKTTAS791TRKVSLAPQA
801-850801NLTELDIYSR811RLSQETGLEI821SEEINEEDLK831ECFFDDMESI841PAVTTWNTYL
851-900851RYITVHKSLI861FVLIWCLVIF871LAEVAASLVV881LWLLGNTPLQ891DKGNSTHSRN
901-950901NSYAVIITST911SSYYVFYIYV921GVADTLLAMG931FFRGLPLVHT941LITVSKILHH
951-1000951KMLHSVLQAP961MSTLNTLKAG971GILNRFSKDI981AILDDLLPLT991IFDFIQLLLI
1001-10501001VIGAIAVVAV1011LQPYIFVATV1021PVIVAFIMLR1031AYFLQTSQQL1041KQLESEGRSP
1051-11001051IFTHLVTSLK1061GLWTLRAFGR1071QPYFETLFHK1081ALNLHTANWF1091LYLSTLRWFQ
1101-11501101MRIEMIFVIF1111FIAVTFISIL1121TTGEGEGRVG1131IILTLAMNIM1141STLQWAVNSS
1151-12001151IDVDSLMRSV1161SRVFKFIDMP1171TEGKPTKSTK1181PYKNGQLSKV1191MIIENSHVKK
1201-12501201DDIWPSGGQM1211TVKDLTAKYT1221EGGNAILENI1231SFSISPGQRV1241GLLGRTGSGK
1251-13001251STLLSAFLRL1261LNTEGEIQID1271GVSWDSITLQ1281QWRKAFGVIP1291QKVFIFSGTF
1301-13501301RKNLDPYEQW1311SDQEIWKVAD1321EVGLRSVIEQ1331FPGKLDFVLV1341DGGCVLSHGH
1351-14001351KQLMCLARSV1361LSKAKILLLD1371EPSAHLDPVT1381YQIIRRTLKQ1391AFADCTVILC
1401-14501401EHRIEAMLEC1411QQFLVIEENK1421VRQYDSIQKL1431LNERSLFRQA1441ISPSDRVKLF
1451-14801451PHRNSSKCKS1461KPQIAALKEE1471TEEEVQDTRL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 76 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.89
|
|
| 128 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.96
|
|
| 225 | - | - | - |
Deep-Palm: 0.93
|
|
| 276 | - | - | - |
Deep-Palm: 0.10
|
|
| 343 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.70
|
|
| 491 | - | - | - |
Deep-Palm: 0.48
|
|
| 524 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.65
|
| 590 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.91
|
|
| 592 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.84
|
|
| 647 | - | - | - |
Deep-Palm: 0.82
|
|
| 832 | - | - | - |
Deep-Palm: 0.15
|
|
| 866 | - | - | - |
Deep-Palm: 0.71
|
|
| 1344 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.97
|
|
| 1355 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.98
|
|
| 1395 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.96
|
| 1400 | - | - | - |
Deep-Palm: 0.93
|
|
| 1410 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.77
|
|
| 1458 | - | - | - |
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 57 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 109 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |
| 117 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 316 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 347 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 364 | S → C | 0.002288 | SNP | Missense Mutation | STAD |
| 380 | Y → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 563 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 917 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1066 | R → C | 0.004283 | SNP | Missense Mutation | SKCM |
| 1089 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 1107 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1297 | S → C | 0.002288 | SNP | Missense Mutation | STAD |
| 1410 | C → C | 0.002033 | SNP | Silent | LUSC |