Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P16109 | SELP | P-selectin (CD62 antigen-like family member … | Homo sapiens (Human) | 830 aa |
Protein Details: P16109 (SELP)
Protein Information
| Accession | P16109 |
|---|---|
| Protein Names | P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P) |
| Gene Symbol | SELP |
| Organism | Homo sapiens (Human) |
| Length | 830 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MANCQIAILY11QRFQRVVFGI21SQLLCFSALI31SELTNQKEVA41AWTYHYSTKA
51-10051YSWNISRKYC61QNRYTDLVAI71QNKNEIDYLN81KVLPYYSSYY91WIGIRKNNKT
101-150101WTWVGTKKAL111TNEAENWADN121EPNNKRNNED131CVEIYIKSPS141APGKWNDEHC
151-200151LKKKHALCYT161ASCQDMSCSK171QGECLETIGN181YTCSCYPGFY191GPECEYVREC
201-250201GELELPQHVL211MNCSHPLGNF221SFNSQCSFHC231TDGYQVNGPS241KLECLASGIW
251-300251TNKPPQCLAA261QCPPLKIPER271GNMTCLHSAK281AFQHQSSCSF291SCEEGFALVG
301-350301PEVVQCTASG311VWTAPAPVCK321AVQCQHLEAP331SEGTMDCVHP341LTAFAYGSSC
351-400351KFECQPGYRV361RGLDMLRCID371SGHWSAPLPT381CEAISCEPLE391SPVHGSMDCS
401-450401PSLRAFQYDT411NCSFRCAEGF421MLRGADIVRC431DNLGQWTAPA441PVCQALQCQD
451-500451LPVPNEARVN461CSHPFGAFRY471QSVCSFTCNE481GLLLVGASVL491QCLATGNWNS
501-550501VPPECQAIPC511TPLLSPQNGT521MTCVQPLGSS531SYKSTCQFIC541DEGYSLSGPE
551-600551RLDCTRSGRW561TDSPPMCEAI571KCPELFAPEQ581GSLDCSDTRG591EFNVGSTCHF
601-650601SCDNGFKLEG611PNNVECTTSG621RWSATPPTCK631GIASLPTPGV641QCPALTTPGQ
651-700651GTMYCRHHPG661TFGFNTTCYF671GCNAGFTLIG681DSTLSCRPSG691QWTAVTPACR
701-750701AVKCSELHVN711KPIAMNCSNL721WGNFSYGSIC731SFHCLEGQLL741NGSAQTACQE
751-800751NGHWSTTVPT761CQAGPLTIQE771ALTYFGGAVA781STIGLIMGGT791LLALLRKRFR
801-830801QKDDGKCPLN811PHSHLGTYGV821FTNAAFDPSP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 25 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.88
|
|
| 60 | - | - | - |
Deep-Palm: 0.08
|
|
| 131 | - | - | - |
Deep-Palm: 0.05
|
|
| 150 | - | - | - |
Deep-Palm: 0.29
|
|
| 158 | - | - | - |
Deep-Palm: 0.11
|
|
| 163 | - | - | - |
Deep-Palm: 0.16
|
|
| 168 | - | - | - |
Deep-Palm: 0.03
|
|
| 174 | - | - | - |
Deep-Palm: 0.02
|
|
| 183 | - | - | - |
Deep-Palm: 0.03
|
|
| 185 | - | - | - |
Deep-Palm: 0.03
|
|
| 194 | - | - | - |
Deep-Palm: 0.04
|
|
| 200 | - | - | - |
Deep-Palm: 0.04
|
|
| 213 | - | - | - |
Deep-Palm: 0.14
|
|
| 226 | - | - | - |
Deep-Palm: 0.02
|
|
| 230 | - | - | - |
Deep-Palm: 0.06
|
|
| 244 | - | - | - |
Deep-Palm: 0.25
|
|
| 257 | - | - | - |
Deep-Palm: 0.46
|
|
| 262 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.22
|
|
| 275 | - | - | - |
Deep-Palm: 0.50
|
|
| 288 | - | - | - |
Deep-Palm: 0.15
|
|
| 292 | - | - | - |
Deep-Palm: 0.21
|
|
| 306 | - | - | - |
Deep-Palm: 0.85
|
|
| 319 | - | - | - |
Deep-Palm: 0.33
|
|
| 324 | - | - | - |
Deep-Palm: 0.14
|
|
| 337 | - | - | - |
Deep-Palm: 0.27
|
|
| 350 | - | - | - |
Deep-Palm: 0.12
|
|
| 354 | - | - | - |
Deep-Palm: 0.26
|
|
| 368 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.58
|
|
| 381 | - | - | - |
Deep-Palm: 0.22
|
|
| 386 | - | - | - |
Deep-Palm: 0.07
|
|
| 399 | - | - | - |
Deep-Palm: 0.37
|
|
| 412 | - | - | - |
Deep-Palm: 0.12
|
|
| 416 | - | - | - |
Deep-Palm: 0.11
|
|
| 430 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.55
|
|
| 443 | - | - | - |
Deep-Palm: 0.24
|
|
| 448 | - | - | - |
Deep-Palm: 0.19
|
|
| 461 | - | - | - |
Deep-Palm: 0.20
|
|
| 474 | - | - | - |
Deep-Palm: 0.34
|
|
| 478 | - | - | - |
Deep-Palm: 0.68
|
|
| 492 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.87
|
|
| 505 | - | - | - |
Deep-Palm: 0.11
|
|
| 510 | - | - | - |
Deep-Palm: 0.05
|
|
| 523 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.38
|
|
| 536 | - | - | - |
Deep-Palm: 0.11
|
|
| 540 | - | - | - |
Deep-Palm: 0.31
|
|
| 554 | - | - | - |
Deep-Palm: 0.67
|
|
| 567 | - | - | - |
Deep-Palm: 0.34
|
|
| 572 | - | - | - |
Deep-Palm: 0.14
|
|
| 585 | - | - | - |
Deep-Palm: 0.59
|
|
| 598 | - | - | - |
Deep-Palm: 0.06
|
|
| 602 | - | - | - |
Deep-Palm: 0.04
|
|
| 616 | - | - | - |
Deep-Palm: 0.20
|
|
| 629 | - | - | - |
Deep-Palm: 0.55
|
|
| 642 | - | - | - |
Deep-Palm: 0.55
|
|
| 655 | - | - | - |
Deep-Palm: 0.06
|
|
| 668 | - | - | - |
Deep-Palm: 0.02
|
|
| 672 | - | - | - |
Deep-Palm: 0.04
|
|
| 686 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.86
|
|
| 699 | - | - | - |
Deep-Palm: 0.41
|
|
| 704 | - | - | - |
Deep-Palm: 0.11
|
|
| 717 | - | - | - |
Deep-Palm: 0.06
|
|
| 730 | - | - | - |
Deep-Palm: 0.04
|
|
| 734 | - | - | - |
Deep-Palm: 0.06
|
|
| 748 | - | - | - |
Deep-Palm: 0.16
|
|
| 761 | - | - | - |
Deep-Palm: 0.12
|
|
| 807 | DBPTM SWISSPALM | - | - | - |
Deep-Palm: 0.77
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 57 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 63 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 63 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |
| 63 | R → C | 0.004283 | SNP | Missense Mutation | SKCM |
| 117 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 131 | C → C | 0.004219 | SNP | Silent | SARC |
| 163 | C → C | 0.003460 | SNP | Silent | CESC |
| 168 | C → Y | 0.001887 | SNP | Missense Mutation | UCEC |
| 185 | C → Y | 0.001764 | SNP | Missense Mutation | LUAD |
| 213 | C → Y | 0.002033 | SNP | Missense Mutation | LUSC |
| 262 | C → W | 0.002033 | SNP | Missense Mutation | LUSC |
| 262 | C → Y | 0.002033 | SNP | Missense Mutation | LUSC |
| 292 | C → Y | 0.001014 | SNP | Missense Mutation | BRCA |
| 306 | C → F | 0.002294 | SNP | Missense Mutation | OV |
| 324 | C → Y | 0.001969 | SNP | Missense Mutation | HNSC |
| 381 | C → C | 0.002506 | SNP | Silent | COAD |
| 415 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |
| 415 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 443 | C → S | 0.001014 | SNP | Missense Mutation | BRCA |
| 510 | C → R | 0.001969 | SNP | Missense Mutation | HNSC |
| 559 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 559 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 671 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 721 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 730 | C → R | 0.001764 | SNP | Missense Mutation | LUAD |
| 798 | R → C | 0.005013 | SNP | Missense Mutation | COAD |
| 807 | C → F | 0.002288 | SNP | Missense Mutation | STAD |
| 183* | C → ? | 0.007299 | SNP | Nonsense Mutation | READ |
| 717* | C → ? | 0.001887 | SNP | Nonsense Mutation | UCEC |