Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P16460 | Ass1 | Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate … | Mus musculus (Mouse) | 412 aa |
Protein Details: P16460 (Ass1)
Protein Information
| Accession | P16460 |
|---|---|
| Protein Names | Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase) |
| Gene Symbol | Ass1 |
| Organism | Mus musculus (Mouse) |
| Length | 412 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29660268 29733200 31311849 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSKGSVVLA11YSGGLDTSCI21LVWLKEQGYD31VIAYLANIGQ41KEDFEEARKK
51-10051ALKLGAKKVF61IEDVSKEFVE71EFIWPAVQSS81ALYEDRYLLG91TSLARPCIAR
101-150101RQVEIAQREG111AKYVSHGATG121KGNDQVRFEL131TCYSLAPQIK141VIAPWRMPEF
151-200151YNRFKGRNDL161MEYAKQHGIP171IPVTPKSPWS181MDENLMHISY191EAGILENPKN
201-250201QAPPGLYTKT211QDPAKAPNSP221DVLEIEFKKG231VPVKVTNIKD241GTTRTTSLEL
251-300251FMYLNEVAGK261HGVGRIDIVE271NRFIGMKSRG281IYETPAGTIL291YHAHLDIEAF
301-350301TMDREVRKIK311QGLGLKFAEL321VYTGFWHSPE331CEFVRHCIQK341SQERVEGKVQ
351-400351VSVFKGQVYI361LGRESPLSLY371NEELVSMNVQ381GDYEPIDATG391FININSLRLK
401-412401EYHRLQSKVT411AK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 19 | Adenine nucleotide alpha hydrolases-like Arginosuccinate synthase-like, N-terminal domain Argininosuccinate synthase Rossmann-like alpha/beta/alpha sandwich fold | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.80
|
|
| 97 | SWISSPALM DBPTM CYSMODDB | Arginosuccinate synthase N-terminal HUP domain |
Liver
(28526873)
|
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 132 | SWISSPALM DBPTM CYSMODDB | Arginosuccinate synthase N-terminal HUP domain |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.83
Deep-Palm: 0.88
|
| 331 | SWISSPALM DBPTM CYSMODDB | Arginosuccinate synthase C-terminal domain |
Brain
(31311849)
Liver
(28526873)
|
Brain
(31311849)
|
Deep-Palm: 0.24
|
| 337 | - | - | - |
Deep-Palm: 0.22
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
6
Liver
Specificity: 0.316
6/6 (100.0%)
3
Brain
Specificity: 0.158
3/3 (100.0%)
2
Testis
Specificity: 0.105
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.053
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
7
Brain tissue (Mass)
Specificity: 0.368
7/56 (12.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.