Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P16858 | Gapdh; Gapd | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) … | Mus musculus (Mouse) | 333 aa |
Protein Details: P16858 (Gapdh)
Protein Information
| Accession | P16858 |
|---|---|
| Protein Names | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) (Peptidyl-cysteine S-nitrosylase GAPDH) (EC 2.6.99.-) |
| Gene Symbol | Gapdh; Gapd |
| Organism | Mus musculus (Mouse) |
| Length | 333 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26165157 28526873 29733200 31311849 31772009 34884899 35358180 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.543
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.543
19/19 (100.0%)
9
Brain tissue
Specificity: 0.257
9/12 (75.0%)
3
Neural Stem Cells
Specificity: 0.086
3/3 (100.0%)
3
Liver membrane
Specificity: 0.086
3/6 (50.0%)
1
Testis
Specificity: 0.029
1/2 (50.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MVKVGVNGFG11RIGRLVTRAA21ICSGKVEIVA31INDPFIDLNY41MVYMFQYDST
51-10051HGKFNGTVKA61ENGKLVINGK71PITIFQERDP81TNIKWGEAGA91EYVVESTGVF
101-150101TTMEKAGAHL111KGGAKRVIIS121APSADAPMFV131MGVNHEKYDN141SLKIVSNASC
151-200151TTNCLAPLAK161VIHDNFGIVE171GLMTTVHAIT181ATQKTVDGPS191GKLWRDGRGA
201-250201AQNIIPASTG211AAKAVGKVIP221ELNGKLTGMA231FRVPTPNVSV241VDLTCRLEKP
251-300251AKYDDIKKVV261KQASEGPLKG271ILGYTEDQVV281SCDFNSNSHS291STFDAGAGIA
301-333301LNDNFVKLIS311WYDNEYGYSN321RVVDLMAYMA331SKE
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 22 | Experimental Prediction (High) | Glyceraldehyde 3-phosphate dehydrogenase NAD binding domain | 39008777 |
| 150 | Experimental CYSMODDB DBPTM Prediction (High) | - | 31311849, 39008777, 28526873 |
| 154 | Experimental CYSMODDB DBPTM Prediction (Medium) | Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain | 31311849, 39008777, 28526873 |
| 245 | Experimental CYSMODDB Prediction (Low) | Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain | 26165157, 31311849, 39008777, 28526873 |
| 282 | Experimental | Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain | 31311849 |