Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P17563 | Selenbp1 | Methanethiol oxidase (MTO) (EC 1.8.3.4) … | Mus musculus (Mouse) | 472 aa |
Protein Details: P17563 (Selenbp1)
Protein Information
| Accession | P17563 |
|---|---|
| Protein Names | Methanethiol oxidase (MTO) (EC 1.8.3.4) (56 kDa selenium-binding protein) (SBP56) (SP56) (Selenium-binding protein 1) |
| Gene Symbol | Selenbp1 |
| Organism | Mus musculus (Mouse) |
| Length | 472 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATKCTKCGP11GYSTPLEAMK21GPREEIVYLP31CIYRNTGTEA41PDYLATVDVD
51-10051PKSPQYSQVI61HRLPMPYLKD71ELHHSGWNTC81SSCFGDSTKS91RNKLILPGLI
101-150101SSRIYVVDVG111SEPRAPKLHK121VIEASEIQAK131CNVSSLHTSH141CLASGEVMVS
151-200151TLGDLQGNGK161GSFVLLDGET171FEVKGTWEKP181GDAAPMGYDF191WYQPRHNVMV
201-250201STEWAAPNVF211KDGFNPAHVE221AGLYGSRIFV231WDWQRHEIIQ241TLQMTDGLIP
251-300251LEIRFLHDPS261ATQGFVGCAL271SSNIQRFYKN281AEGTWSVEKV291IQVPSKKVKG
301-350301WMLPEMPGLI311TDILLSLDDR321FLYFSNWLHG331DIRQYDISNP341QKPRLAGQIF
351-400351LGGSIVRGGS361VQVLEDQELT371CQPEPLVVKG381KRIPGGPQMI391QLSLDGKRLY
401-450401ATTSLYSAWD411KQFYPDLIRE421GSMMLQIDVD431TVNGGLKLNP441NFLVDFGKEP
451-472451LGPALAHELR461YPGGDCSSDI471WI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.02
|
|
| 8 | SWISSPALM DBPTM CYSMODDB | 56kDa selenium binding protein (SBP56) |
Liver
(28526873)
| - |
GPS-Palm: 0.86
Deep-Palm: 0.02
|
| 31 | SWISSPALM DBPTM CYSMODDB | Selenium-binding protein 56kDa selenium binding protein (SBP56) |
Liver
(28526873)
| - |
GPS-Palm: 0.86
Deep-Palm: 0.96
|
| 80 | - | - | - |
Deep-Palm: 0.29
|
|
| 83 | - | - | - |
Deep-Palm: 0.59
|
|
| 131 | - | - | - |
Deep-Palm: 0.76
|
|
| 141 | - | - | - |
Deep-Palm: 0.82
|
|
| 268 | SWISSPALM DBPTM CYSMODDB | 56kDa selenium binding protein (SBP56) |
Liver
(28526873)
|
Liver
(37925639)
Brain
(35358180)
|
GPS-Palm: 0.81
Deep-Palm: 0.92
|
| 371 | - | - |
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 466 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.05
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.250
6/6 (100.0%)
2
Brain
Specificity: 0.083
2/2 (100.0%)
2
Testis
Specificity: 0.083
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.643
9
Brain tissue (Mass)
Specificity: 0.375
9/56 (16.1%)
5
Liver tissue (Mass)
Specificity: 0.208
5/8 (62.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.