Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P19536 | Cox5b | Cytochrome c oxidase subunit 5B, … | Mus musculus (Mouse) | 128 aa |
Protein Details: P19536 (Cox5b)
Protein Information
| Accession | P19536 |
|---|---|
| Protein Names | Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb) |
| Gene Symbol | Cox5b |
| Organism | Mus musculus (Mouse) |
| Length | 128 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASRLLRGVG11ALAAQALRRT21ARGAAVTRSM31ASGGGVPTDE41EQATGLEREI
51-10051MIAAQKGLDP61YNMLPPKAAS71GTKEDPNLVP81SISNKRIVGC91ICEEDNCTVI
101-128101WFWLHKGESQ111RCPNCGTHYK121LVPHQMAH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 90 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 92 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 97 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 112 | - |
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.02
|
|
| 115 | SWISSPALM DBPTM CYSMODDB | Cytochrome c oxidase subunit Vb |
Liver
(28526873)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.194
6/6 (100.0%)
5
Brain
Specificity: 0.161
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
20
Brain tissue (Mass)
Specificity: 0.645
20/56 (35.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.