Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P20152 | Vim | Vimentin | Mus musculus (Mouse) | 466 aa |
Protein Details: P20152 (Vim)
Protein Information
| Accession | P20152 |
|---|---|
| Protein Names | Vimentin |
| Gene Symbol | Vim |
| Organism | Mus musculus (Mouse) |
| Length | 466 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 31772009 34884899 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.412
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
7
Liver tissue
Specificity: 0.412
7/19 (36.8%)
6
Liver membrane
Specificity: 0.353
6/6 (100.0%)
3
Neural Stem Cells
Specificity: 0.176
3/3 (100.0%)
1
Macrophage Raw 264.7
Specificity: 0.059
1/2 (50.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSTRSVSSSS11YRRMFGGSGT21SSRPSSNRSY31VTTSTRTYSL41GSALRPSTSR
51-10051SLYSSSPGGA61YVTRSSAVRL71RSSVPGVRLL81QDSVDFSLAD91AINTEFKNTR
101-150101TNEKVELQEL111NDRFANYIDK121VRFLEQQNKI131LLAELEQLKG141QGKSRLGDLY
151-200151EEEMRELRRQ161VDQLTNDKAR171VEVERDNLAE181DIMRLREKLQ191EEMLQREEAE
201-250201STLQSFRQDV211DNASLARLDL221ERKVESLQEE231IAFLKKLHDE241EIQELQAQIQ
251-300251EQHVQIDVDV261SKPDLTAALR271DVRQQYESVA281AKNLQEAEEW291YKSKFADLSE
301-350301AANRNNDALR311QAKQESNEYR321RQVQSLTCEV331DALKGTNESL341ERQMREMEEN
351-400351FALEAANYQD361TIGRLQDEIQ371NMKEEMARHL381REYQDLLNVK391MALDIEIATY
401-450401RKLLEGEESR411ISLPLPTFSS421LNLRETNLES431LPLVDTHSKR441TLLIKTVETR
451-466451DGQVINETSQ461HHDDLE
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 328 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Low) | Intermediate filament protein | 28526873 |