Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P20618 | PSMB1 | Proteasome subunit beta type-1 (Macropain … | Homo sapiens (Human) | 241 aa |
Protein Details: P20618 (PSMB1)
Protein Information
| Accession | P20618 |
|---|---|
| Protein Names | Proteasome subunit beta type-1 (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain) (Proteasome subunit beta-6) (beta-6) |
| Gene Symbol | PSMB1 |
| Organism | Homo sapiens (Human) |
| Length | 241 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 32944167 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLSSTAMYSA11PGRDLGMEPH21RAAGPLQLRF31SPYVFNGGTI41LAIAGEDFAI
51-10051VASDTRLSEG61FSIHTRDSPK71CYKLTDKTVI81GCSGFHGDCL91TLTKIIEARL
101-150101KMYKHSNNKA111MTTGAIAAML121STILYSRRFF131PYYVYNIIGG141LDEEGKGAVY
151-200151SFDPVGSYQR161DSFKAGGSAS171AMLQPLLDNQ181VGFKNMQNVE191HVPLSLDRAM
201-241201RLVKDVFISA211AERDVYTGDA221LRICIVTKEG231IREETVSLRK241D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 71 | - | - | - |
Deep-Palm: 0.81
|
|
| 82 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.89
|
|
| 89 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.94
|
|
| 224 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
1
HAP1 cell
Specificity: 0.333
1/1 (100.0%)
1
PC3
Specificity: 0.333
1/1 (100.0%)
1
293T cell
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.