Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P21614 | Gc | Vitamin D-binding protein (DBP) (VDB) … | Mus musculus (Mouse) | 476 aa |
Protein Details: P21614 (Gc)
Protein Information
| Accession | P21614 |
|---|---|
| Protein Names | Vitamin D-binding protein (DBP) (VDB) (Gc-globulin) (Group-specific component) |
| Gene Symbol | Gc |
| Organism | Mus musculus (Mouse) |
| Length | 476 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKRVLVLLLA11LAFGHALERG21RDYEKDKVCN31ELAMLGKEDF41RSLSLILYSR
51-10051KFSSSTFEQV61NQLVKEVVSL71TEECCAEGAD81PTCYDTRTSE91LSVKSCESDA
101-150101PFPVHPGTPE111CCTKEGLERK121LCMAALSHQP131QEFPTYVEPT141NDEICEAFRR
151-200151DPKGFADQFL161YEYSSNYGQA171PLPLLVAYTK181NYLSMVGSCC191TSANPTVCFV
201-250201KERLQMKHLS211LLTTMSNRVC221SQYAAYGKEK231SRLSHLIKLA241QKVPTANLEN
251-300251VLPLAEDFTE261ILSRCCESTS271EDCMASELPE281HTIKICQNLS291KKNSKFEECC
301-350301QENTPMNIFM311CTYFMPAAEP321LQLPAIKLPT331GKDLCGQSTT341QAMDQYTFEL
351-400351SRRTQVPEVF361LSKVLEPTLK371TLRECCDTQD381SVACFSTQSP391LLKRQLTSFI
401-450401EKGQEMCADY411SENTFTEYKK421KLAERLRTKT431PNTSPAELKD441MVEKHSDFAS
451-476451KCCSINSPPL461YCSSQIDAEM471IDTLQS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | Serum albumin-like Serum albumin, N-terminal | - | - |
Deep-Palm: 0.94
|
|
| 74 | - | - | - |
Deep-Palm: 0.81
|
|
| 75 | - | - | - |
Deep-Palm: 0.85
|
|
| 83 | - | - | - |
Deep-Palm: 0.55
|
|
| 96 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.29
|
|
| 111 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.73
|
|
| 112 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.87
|
|
| 122 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 145 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.49
|
|
| 189 | - | - | - |
Deep-Palm: 0.82
|
|
| 190 | - | - | - |
Deep-Palm: 0.64
|
|
| 198 | - | - | - |
Deep-Palm: 0.72
|
|
| 220 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.84
|
| 265 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.84
|
|
| 266 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 273 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.14
|
|
| 286 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.30
|
|
| 299 | - | - | - |
Deep-Palm: 0.05
|
|
| 300 | - | - | - |
Deep-Palm: 0.05
|
|
| 311 | - | - | - |
Deep-Palm: 0.13
|
|
| 335 | - | - | - |
Deep-Palm: 0.92
|
|
| 375 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 376 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 384 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 407 | - | - | - |
Deep-Palm: 0.57
|
|
| 452 | - | - | - |
Deep-Palm: 0.25
|
|
| 453 | - | - | - |
Deep-Palm: 0.21
|
|
| 462 | - | - | - |
Deep-Palm: 0.09
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.200
4/4 (100.0%)
2
Testis
Specificity: 0.100
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
12
Brain tissue (Mass)
Specificity: 0.600
12/56 (21.4%)
2
Liver tissue (Mass)
Specificity: 0.100
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.