Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P21926 | CD9; MIC3; TSPAN29; GIG2 | CD9 antigen (5H9 antigen) (Cell … | Homo sapiens (Human) | 228 aa |
Protein Details: P21926 (CD9)
Protein Information
| Accession | P21926 |
|---|---|
| Protein Names | CD9 antigen (5H9 antigen) (Cell growth-inhibiting gene 2 protein) (Leukocyte antigen MIC3) (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29) (p24) (CD antigen CD9) |
| Gene Symbol | CD9; MIC3; TSPAN29; GIG2 |
| Organism | Homo sapiens (Human) |
| Length | 228 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19801377 22496122 24357059 26111759 26876311 29575903 29733200 31251020 33636221 36430497 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.710
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
44
LNCaP cells
Specificity: 0.710
44/46 (95.7%)
4
HAP1 cells
Specificity: 0.065
4/10 (40.0%)
4
Cerebral cortex
Specificity: 0.065
4/4 (100.0%)
3
T cells
Specificity: 0.048
3/4 (75.0%)
2
DU145 cells
Specificity: 0.032
2/2 (100.0%)
2
Endothelial cells
Specificity: 0.032
2/2 (100.0%)
1
HeLa cells
Specificity: 0.016
1/1 (100.0%)
1
Prefrontal cortex
Specificity: 0.016
1/1 (100.0%)
1
Liver membrane
Specificity: 0.016
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MPVKGGTKCI11KYLLFGFNFI21FWLAGIAVLA31IGLWLRFDSQ41TKSIFEQETN
51-10051NNNSSFYTGV61YILIGAGALM71MLVGFLGCCG81AVQESQCMLG91LFFGFLLVIF
101-150101AIEIAAAIWG111YSHKDEVIKE121VQEFYKDTYN131KLKTKDEPQR141ETLKAIHYAL
151-200151NCCGLAGGVE161QFISDICPKK171DVLETFTVKS181CPDAIKEVFD191NKFHIIGAVG
201-228201IGIAVVMIFG211MIFSMILCCA221IRRNREMV
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 9 | DBPTM SWISSPALM Prediction (Medium) | - | - |
| 78 | DBPTM SWISSPALM Prediction (Medium) | Tetraspanin family | - |
| 79 | DBPTM SWISSPALM Prediction (Medium) | Tetraspanin family | - |
| 87 | DBPTM SWISSPALM | Tetraspanin family | - |
| 152 | Experimental Prediction (High) | - | 29575903 |
| 153 | Experimental Prediction (High) | - | 29575903 |
| 167 | CYSMODDB SWISSPALM DBPTM Prediction (Medium) | - | - |
| 181 | Prediction (Medium) | - | - |
| 218 | DBPTM SWISSPALM Prediction (High) | - | - |
| 219 | DBPTM SWISSPALM Prediction (High) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 12 | Y → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 222 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 152* | C → ? | 0.001887 | SNP | Nonsense Mutation | UCEC |
| 78* | C → ? | 0.001887 | SNP | Nonsense Mutation | UCEC |