Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P22888 | LHCGR | Lutropin-choriogonadotropic hormone receptor (LH/CG-R) (Luteinizing … | Homo sapiens (Human) | 699 aa |
Protein Details: P22888 (LHCGR)
Protein Information
| Accession | P22888 |
|---|---|
| Protein Names | Lutropin-choriogonadotropic hormone receptor (LH/CG-R) (Luteinizing hormone receptor) (LHR) (LSH-R) |
| Gene Symbol | LHCGR |
| Organism | Homo sapiens (Human) |
| Length | 699 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKQRFSALQL11LKLLLLLQPP21LPRALREALC31PEPCNCVPDG41ALRCPGPTAG
51-10051LTRLSLAYLP61VKVIPSQAFR71GLNEVIKIEI81SQIDSLERIE91ANAFDNLLNL
101-150101SEILIQNTKN111LRYIEPGAFI121NLPRLKYLSI131CNTGIRKFPD141VTKVFSSESN
151-200151FILEICDNLH161ITTIPGNAFQ171GMNNESVTLK181LYGNGFEEVQ191SHAFNGTTLT
201-250201SLELKENVHL211EKMHNGAFRG221ATGPKTLDIS231STKLQALPSY241GLESIQRLIA
251-300251TSSYSLKKLP261SRETFVNLLE271ATLTYPSHCC281AFRNLPTKEQ291NFSHSISENF
301-350301SKQCESTVRK311VNNKTLYSSM321LAESELSGWD331YEYGFCLPKT341PRCAPEPDAF
351-400351NPCEDIMGYD361FLRVLIWLIN371ILAIMGNMTV381LFVLLTSRYK391LTVPRFLMCN
401-450401LSFADFCMGL411YLLLIASVDS421QTKGQYYNHA431IDWQTGSGCS441TAGFFTVFAS
451-500451ELSVYTLTVI461TLERWHTITY471AIHLDQKLRL481RHAILIMLGG491WLFSSLIAML
501-550501PLVGVSNYMK511VSICFPMDVE521TTLSQVYILT531ILILNVVAFF541IICACYIKIY
551-600551FAVRNPELMA561TNKDTKIAKK571MAILIFTDFT581CMAPISFFAI591SAAFKVPLIT
601-650601VTNSKVLLVL611FYPINSCANP621FLYAIFTKTF631QRDFFLLLSK641FGCCKRRAEL
651-699651YRRKDFSAYT661SNCKNGFTGS671NKPSQSTLKL681STLHCQGTAL691LDKTRYTEC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 30 | Lutropin-choriogonadotropic hormone receptor | - | - |
Deep-Palm: 0.97
|
|
| 34 | Lutropin-choriogonadotropic hormone receptor | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.94
|
|
| 36 | Lutropin-choriogonadotropic hormone receptor | - | - |
Deep-Palm: 0.93
|
|
| 44 | Lutropin-choriogonadotropic hormone receptor | - | - |
Deep-Palm: 0.91
|
|
| 131 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.94
|
|
| 156 | - | - | - |
Deep-Palm: 0.22
|
|
| 279 | - | - | - |
Deep-Palm: 0.47
|
|
| 280 | - | - | - |
Deep-Palm: 0.51
|
|
| 304 | - | - | - |
Deep-Palm: 0.31
|
|
| 336 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.65
|
|
| 343 | - | - | - |
Deep-Palm: 0.06
|
|
| 353 | - | - | - |
Deep-Palm: 0.40
|
|
| 399 | - | - | - |
Deep-Palm: 0.75
|
|
| 407 | - | - | - |
Deep-Palm: 0.26
|
|
| 439 | - | - | - |
Deep-Palm: 0.14
|
|
| 514 | - | - | - |
Deep-Palm: 0.49
|
|
| 543 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.31
|
|
| 545 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.36
|
|
| 581 | - | - | - |
Deep-Palm: 0.13
|
|
| 617 | - | - | - |
Deep-Palm: 0.19
|
|
| 643 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.95
|
| 644 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.93
|
| 663 | - | - | - |
Deep-Palm: 0.69
|
|
| 685 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.93
|
|
| 699 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 43 | R → C | 0.005435 | SNP | Missense Mutation | ESCA |
| 182 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 219 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 279 | C → F | 0.001764 | SNP | Missense Mutation | LUAD |
| 279 | C → C | 0.003774 | SNP | Silent | UCEC |
| 292 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 317 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |
| 343 | C → S | 0.001014 | SNP | Missense Mutation | BRCA |
| 388 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 589 | A → Cfs*17 | 0.005013 | INS | Frame Shift Ins | COAD |
| 589 | A → Cfs*17 | 0.001887 | INS | Frame Shift Ins | UCEC |
| 641 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 644 | C → G | 0.002033 | SNP | Missense Mutation | LUSC |
| 663 | C → S | 0.002033 | SNP | Missense Mutation | LUSC |
| 666 | G → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 439* | C → ? | 0.002545 | SNP | Nonsense Mutation | GBM |
| 643* | C → ? | 0.002033 | SNP | Nonsense Mutation | LUSC |