Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P25911 | Lyn | Tyrosine-protein kinase Lyn (EC 2.7.10.2) … | Mus musculus (Mouse) | 512 aa |
Protein Details: P25911 (Lyn)
Protein Information
| Accession | P25911 |
|---|---|
| Protein Names | Tyrosine-protein kinase Lyn (EC 2.7.10.2) (V-yes-1 Yamaguchi sarcoma viral related oncogene homolog) (p53Lyn) (p56Lyn) |
| Gene Symbol | Lyn |
| Organism | Mus musculus (Mouse) |
| Length | 512 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29575903 29733200 31772009 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGCIKSKRKD11NLNDDEVDSK21TQPVRNTDRT31IYVRDPTSNK41QQRPVPEFHL
51-10051LPGQRFQTKD61PEEQGDIVVA71LYPYDGIHPD81DLSFKKGEKM91KVLEEHGEWW
101-150101KAKSLSSKRE111GFIPSNYVAK121VNTLETEEWF131FKDITRKDAE141RQLLAPGNSA
151-200151GAFLIRESET161LKGSFSLSVR171DYDPMHGDVI181KHYKIRSLDN191GGYYISPRIT
201-250201FPCISDMIKH211YQKQSDGLCR221RLEKACISPK231PQKPWDKDAW241EIPRESIKLV
251-300251KKLGAGQFGE261VWMGYYNNST271KVAVKTLKPG281TMSVQAFLEE291ANLMKTLQHD
301-350301KLVRLYAVVT311KEEPIYIITE321FMAKGSLLDF331LKSDEGGKVL341LPKLIDFSAQ
351-400351IAEGMAYIER361KNYIHRDLRA371ANVLVSESLM381CKIADFGLAR391VIEDNEYTAR
401-450401EGAKFPIKWT411APEAINFGCF421TIKSDVWSFG431ILLYEIVTYG441KIPYPGRTNA
451-500451DVMSALSQGY461RMPRMENCPD471ELYDIMKMCW481KEKAEERPTF491DYLQSVLDDF
501-512501YTATEGQYQQ511QP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 203 | SWISSPALM DBPTM CYSMODDB | SH2 domain |
Liver
(28526873)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.27
|
| 219 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.85
|
|
| 226 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.89
|
|
| 381 | - | - | - |
Deep-Palm: 0.95
|
|
| 419 | SWISSPALM DBPTM CYSMODDB | Protein tyrosine and serine/threonine kinase |
Liver
(28526873)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.15
|
| 468 | - | - | - |
Deep-Palm: 0.04
|
|
| 479 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.545
6/6 (100.0%)
3
Raw 264.7
Specificity: 0.273
3/3 (100.0%)
1
Brain
Specificity: 0.091
1/1 (100.0%)
1
NSC
Specificity: 0.091
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.