Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P26006 | ITGA3 | Integrin alpha-3 (CD49 antigen-like family … | Homo sapiens (Human) | 1051 aa |
Protein Details: P26006 (ITGA3)
Protein Information
| Accession | P26006 |
|---|---|
| Protein Names | Integrin alpha-3 (CD49 antigen-like family member C) (FRP-2) (Galactoprotein B3) (GAPB3) (VLA-3 subunit alpha) (CD antigen CD49c) [Cleaved into: Integrin alpha-3 heavy chain; Integrin alpha-3 light chain] |
| Gene Symbol | ITGA3 |
| Organism | Homo sapiens (Human) |
| Length | 1051 aa |
| Isoforms | No isoforms |
| Related PMIDs | 22496122 24357059 33636221 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGPGPSRAPR11APRLMLCALA21LMVAAGGCVV31SAFNLDTRFL41VVKEAGNPGS
51-10051LFGYSVALHR61QTERQQRYLL71LAGAPRELAV81PDGYTNRTGA91VYLCPLTAHK
101-150101DDCERMNITV111KNDPGHHIIE121DMWLGVTVAS131QGPAGRVLVC141AHRYTQVLWS
151-200151GSEDQRRMVG161KCYVRGNDLE171LDSSDDWQTY181HNEMCNSNTD191YLETGMCQLG
201-250201TSGGFTQNTV211YFGAPGAYNW221KGNSYMIQRK231EWDLSEYSYK241DPEDQGNLYI
251-300251GYTMQVGSFI261LHPKNITIVT271GAPRHRHMGA281VFLLSQEAGG291DLRRRQVLEG
301-350301SQVGAYFGSA311IALADLNNDG321WQDLLVGAPY331YFERKEEVGG341AIYVFMNQAG
351-400351TSFPAHPSLL361LHGPSGSAFG371LSVASIGDIN381QDGFQDIAVG391APFEGLGKVY
401-450401IYHSSSKGLL411RQPQQVIHGE421KLGLPGLATF431GYSLSGQMDV441DENFYPDLLV
451-500451GSLSDHIVLL461RARPVINIVH471KTLVPRPAVL481DPALCTATSC491VQVELCFAYN
501-550501QSAGNPNYRR511NITLAYTLEA521DRDRRPPRLR531FAGSESAVFH541GFFSMPEMRC
551-600551QKLELLLMDN561LRDKLRPIII571SMNYSLPLRM581PDRPRLGLRS591LDAYPILNQA
601-650601QALENHTEVQ611FQKECGPDNK621CESNLQMRAA631FVSEQQQKLS641RLQYSRDVRK
651-700651LLLSINVTNT661RTSERSGEDA671HEALLTLVVP681PALLLSSVRP691PGACQANETI
701-750701FCELGNPFKR711NQRMELLIAF721EVIGVTLHTR731DLQVQLQLST741SSHQDNLWPM
751-800751ILTLLVDYTL761QTSLSMVNHR771LQSFFGGTVM781GESGMKTVED791VGSPLKYEFQ
801-850801VGPMGEGLVG811LGTLVLGLEW821PYEVSNGKWL831LYPTEITVHG841NGSWPCRPPG
851-900851DLINPLNLTL861SDPGDRPSSP871QRRRRQLDPG881GGQGPPPVTL891AAAKKAKSET
901-950901VLTCATGRAH911CVWLECPIPD921APVVTNVTVK931ARVWNSTFIE941DYRDFDRVRV
951-1000951NGWATLFLRT961SIPTINMENK971TTWFSVDIDS981ELVEELPAEI991ELWLVLVAVG
1001-10501001AGLLLLGLII1011LLLWKCGFFK1021RARTRALYEA1031KRQKAEMKSQ1041PSETERLTDD
1051-10511051Y
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.98
|
|
| 28 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.96
|
|
| 94 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.69
|
|
| 103 | - | - | - |
Deep-Palm: 0.19
|
|
| 140 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.97
|
|
| 162 | - | - | - |
Deep-Palm: 0.79
|
|
| 185 | - | - | - |
Deep-Palm: 0.02
|
|
| 197 | - | - | - |
Deep-Palm: 0.06
|
|
| 485 | - | - | - |
Deep-Palm: 0.81
|
|
| 490 | - | - | - |
Deep-Palm: 0.65
|
|
| 496 | - | - | - |
Deep-Palm: 0.13
|
|
| 550 | - | - | - |
Deep-Palm: 0.87
|
|
| 615 | - | - | - |
Deep-Palm: 0.17
|
|
| 621 | - | - | - |
Deep-Palm: 0.14
|
|
| 694 | - | - | - |
Deep-Palm: 0.97
|
|
| 702 | - | - | - |
Deep-Palm: 0.84
|
|
| 846 | - | - | - |
Deep-Palm: 0.66
|
|
| 904 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.93
|
|
| 911 | - | - | - |
Deep-Palm: 0.53
|
|
| 916 | - | - | - |
Deep-Palm: 0.51
|
|
| 1016 | DBPTM | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.99
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
1
EC cell
Specificity: 0.333
1/1 (100.0%)
1
heart
Specificity: 0.333
1/1 (100.0%)
1
HUVECs
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 220 | W → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 237 | Y → C | 0.003559 | SNP | Missense Mutation | KIRP |
| 666 | S → C | 0.015152 | SNP | Missense Mutation | KICH |
| 702 | C → C | 0.001887 | SNP | Silent | UCEC |
| 781 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 913 | W → Cfs*3 | 0.002288 | INS | Frame Shift Ins | STAD |
| 975 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |