Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P26231 | Ctnna1 | Catenin alpha-1 (102 kDa cadherin-associated … | Mus musculus (Mouse) | 906 aa |
Protein Details: P26231 (Ctnna1)
Protein Information
| Accession | P26231 |
|---|---|
| Protein Names | Catenin alpha-1 (102 kDa cadherin-associated protein) (CAP102) (Alpha E-catenin) |
| Gene Symbol | Ctnna1 |
| Organism | Mus musculus (Mouse) |
| Length | 906 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTAVHAGNIN11FKWDPKSLEI21RTLAVERLLE31PLVTQVTTLV41NTNSKGPSNK
51-10051KRGRSKKAHV61LAASVEQATE71NFLEKGDKIA81KESQFLKEEL91VVAVEDVRKQ
101-150101GDLMKSAAGE111FADDPCSSVK121RGNMVRAARA131LLSAVTRLLI141LADMADVYKL
151-200151LVQLKVVEDG161ILKLRNAGNE171QDLGIQYKAL181KPEVDKLNIM191AAKRQQELKD
201-250201VGNRDQMAAA211RGILQKNVPI221LYTASQACLQ231HPDVAAYKAN241RDLIYKQLQQ
251-300251AVTGISNAAQ261ATASDDAAQH271QGGSGGELAY281ALNNFDKQII291VDPLSFSEER
301-350301FRPSLEERLE311SIISGAALMA321DSSCTRDDRR331ERIVAECNAV341RQALQDLLSE
351-400351YMGNAGRKER361SDALNSAIDK371MTKKTRDLRR381QLRKAVMDHV391SDSFLETNVP
401-450401LLVLIEAAKN411GNEKEVKEYA421QVFREHANKL431IEVANLACSI441SNNEEGVKLV
451-500451RMSASQLEAL461CPQVINAALA471LAAKPQSKLA481QENMDLFKEQ491WEKQVRVLTD
501-550501AVDDITSIDD511FLAVSENHIL521EDVNKCVIAL531QEKDVDGLDR541TAGAIRGRAA
551-600551RVIHVVTSEM561DNYEPGVYTE571KVLEATKLLS581NTVMPRFTEQ591VEAAVEALSS
601-650601DPAQPMDENE611FIDASRLVYD621GIRDIRKAVL631MIRTPEELDD641SDFETEDFDV
651-700651RSRTSVQTED661DQLIAGQSAR671AIMAQLPQEQ681KAKIAEQVAS691FQEEKSKLDA
701-750701EVSKWDDSGN711DIIVLAKQMC721MIMMEMTDFT731RGKGPLKNTS741DVISAAKKIA
751-800751EAGSRMDKLG761RTIADHCPDS771ACKQDLLAYL781QRIALYCHQL791NICSKVKAEV
801-850801QNLGGELVVS811GVDSAMSLIQ821AAKNLMNAVV831QTVKASYVAS841TKYQKSQGMA
851-900851SLNLPAVSWK861MKAPEKKPLV871KREKQDETQT881KIKRASQKKH891VNPVQALSEF
901-906901KAMDSI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 116 | SWISSPALM DBPTM CYSMODDB | Vinculin family |
Liver
(28526873)
| - |
GPS-Palm: 0.73
Deep-Palm: 0.96
|
| 228 | - | - | - |
Deep-Palm: 0.93
|
|
| 324 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.85
|
|
| 337 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.83
Deep-Palm: 0.91
|
|
| 438 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.84
|
|
| 461 | - | - | - |
Deep-Palm: 0.98
|
|
| 526 | - | - | - |
Deep-Palm: 0.87
|
|
| 720 | SWISSPALM DBPTM CYSMODDB | Vinculin family |
Forebrain
(28680068)
| - |
GPS-Palm: 0.67
Deep-Palm: 0.05
|
| 767 | - | - | - |
Deep-Palm: 0.89
|
|
| 772 | - | - | - |
Deep-Palm: 0.93
|
|
| 787 | - | - |
Brain
(31311849)
|
GPS-Palm: 0.80
Deep-Palm: 0.92
|
|
| 793 | - | - | - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
Liver
Specificity: 0.500
3/3 (100.0%)
1
Brain
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain tissue (Mass)
Specificity: 0.333
2/56 (3.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.