Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P26369 | U2af2 | Splicing factor U2AF 65 kDa … | Mus musculus (Mouse) | 475 aa |
Protein Details: P26369 (U2af2)
Protein Information
| Accession | P26369 |
|---|---|
| Protein Names | Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) |
| Gene Symbol | U2af2 |
| Organism | Mus musculus (Mouse) |
| Length | 475 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSDFDEFERQ11LNENKQERDK21ENRHRKRSHS31RSRSRDRKRR41SRSRDRRNRD
51-10051QRSASRDRRR61RSKPLTRGAK71EEHGGLIRSP81RHEKKKKVRK91YWDVPPPGFE
101-150101HITPMQYKAM111QAAGQIPATA121LLPTMTPDGL131AVTPTPVPVV141GSQMTRQARR
151-200151LYVGNIPFGI161TEEAMMDFFN171AQMRLGGLTQ181APGNPVLAVQ191INQDKNFAFL
201-250201EFRSVDETTQ211AMAFDGIIFQ221GQSLKIRRPH231DYQPLPGMSE241NPSVYVPGVV
251-300251STVVPDSAHK261LFIGGLPNYL271NDDQVKELLT281SFGPLKAFNL291VKDSATGLSK
301-350301GYAFCEYVDI311NVTDQAIAGL321NGMQLGDKKL331LVQRASVGAK341NATLVSLPST
351-400351INQTPVTLQV361PGLMSSQVQM371GGHPTEVLCL381MNMVLPEELL391DDEEYEEIVE
401-450401DVRDECSKYG411LVKSIEIPRP421VDGVEVPGCG431KIFVEFTSVF441DCQKAMQGLT
451-475451GRKFANRVVV461TKYCDPDSYH471RRDFW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 305 | - | - | - |
Deep-Palm: 0.85
|
|
| 379 | - | - | - |
Deep-Palm: 0.81
|
|
| 406 | - | - | - |
Deep-Palm: 0.77
|
|
| 429 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.80
|
|
| 442 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.64
|
| 464 | - | - | - |
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.600
3/3 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.