Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P26443 | Glud1 | Glutamate dehydrogenase 1, mitochondrial (GDH … | Mus musculus (Mouse) | 558 aa |
Protein Details: P26443 (Glud1)
Protein Information
| Accession | P26443 |
|---|---|
| Protein Names | Glutamate dehydrogenase 1, mitochondrial (GDH 1) (EC 1.4.1.3) |
| Gene Symbol | Glud1 |
| Organism | Mus musculus (Mouse) |
| Length | 558 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MYRRLGEALL11LSRAGPAALG21SAAADSAALL31GWARGQPSAA41PQPGLTPVAR
51-10051RHYSEAAADR61EDDPNFFKMV71EGFFDRGASI81VEDKLVEDLK91TRESEEQKRN
101-150101RVRGILRIIK111PCNHVLSLSF121PIRRDDGSWE131VIEGYRAQHS141QHRTPCKGGI
151-200151RYSTDVSVDE161VKALASLMTY171KCAVVDVPFG181GAKAGVKINP191KNYTDNELEK
201-250201ITRRFTMELA211KKGFIGPGID221VPAPDMSTGE231REMSWIADTY241ASTIGHYDIN
251-300251AHACVTGKPI261SQGGIHGRIS271ATGRGVFHGI281ENFINEASYM291SILGMTPGFG
301-350301DKTFVVQGFG311NVGLHSMRYL321HRFGAKCVGV331GESDGSIWNP341DGIDPKELED
351-400351FKLQHGSILG361FPKAKVYEGS371ILEADCDILI381PAASEKQLTK391SNAPRVKAKI
401-450401IAEGANGPTT411PEADKIFLER421NIMVIPDLYL431NAGGVTVSYF441EWLKNLNHVS
451-500451YGRLTFKYER461DSNYHLLMSV471QESLERKFGK481HGGTIPVVPT491AEFQDRISGA
501-550501SEKDIVHSGL511AYTMERSARQ521IMRTAMKYNL531GLDLRTAAYV541NAIEKVFKVY
551-558551NEAGVTFT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 112 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.88
Deep-Palm: 0.96
|
| 146 | - | - | - |
Deep-Palm: 0.51
|
|
| 172 | SWISSPALM DBPTM CYSMODDB | Glu/Leu/Phe/Val dehydrogenase dimerisation domain |
Brain
(31311849)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.71
Deep-Palm: 0.97
|
| 254 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.43
|
|
| 327 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.76
Deep-Palm: 0.82
|
|
| 376 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase |
Brain
(34200797)
|
Liver
(34884899)
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.125
6/6 (100.0%)
5
Brain
Specificity: 0.104
5/5 (100.0%)
2
Testis
Specificity: 0.042
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
35
Brain tissue (Mass)
Specificity: 0.729
35/56 (62.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.