Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P27601 | Gna13 | Guanine nucleotide-binding protein subunit alpha-13 … | Mus musculus (Mouse) | 377 aa |
Protein Details: P27601 (Gna13)
Protein Information
| Accession | P27601 |
|---|---|
| Protein Names | Guanine nucleotide-binding protein subunit alpha-13 (G alpha-13) (G-protein subunit alpha-13) |
| Gene Symbol | Gna13 |
| Organism | Mus musculus (Mouse) |
| Length | 377 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 29660268 29733200 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADFLPSRSV11LSVCFPGCVL21TNGEAEQQRK31SKEIDKCLSR41EKTYVKRLVK
51-10051ILLLGAGESG61KSTFLKQMRI71IHGQDFDQRA81REEFRPTIYS91NVIKGMRVLV
101-150101DAREKLHIPW111GDNKNQLHGD121KLMAFDTRAP131MAAQGMVETR141VFLQYLPAIR
151-200151ALWEDSGIQN161AYDRRREFQL171GESVKYFLDN181LDKLGVPDYI191PSQQDILLAR
201-250201RPTKGIHEYD211FEIKNVPFKM221VDVGGQRSER231KRWFECFDSV241TSILFLVSSS
251-300251EFDQVLMEDR261QTNRLTESLN271IFETIVNNRV281FSNVSIILFL291NKTDLLEEKV
301-350301QVVSIKDYFL311EFEGDPHCLR321DVQKFLVECF331RGKRRDQQQR341PLYHHFTTAI
351-377351NTENIRLVFR361DVKDTILHDN371LKQLMLQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.93
|
| 18 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.95
|
| 37 | DBPTM SWISSPALM | P-loop containing nucleoside triphosphate hydrolase G-protein alpha subunit | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.95
|
| 236 | - | - | - |
Deep-Palm: 0.89
|
|
| 318 | SWISSPALM DBPTM CYSMODDB | G-protein alpha subunit |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.76
Deep-Palm: 0.89
|
| 329 | SWISSPALM DBPTM CYSMODDB | G-protein alpha subunit |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.77
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
6
Liver
Specificity: 0.133
6/6 (100.0%)
5
Brain
Specificity: 0.111
5/5 (100.0%)
4
Raw 264.7
Specificity: 0.089
4/4 (100.0%)
2
Testis
Specificity: 0.044
2/2 (100.0%)
1
NSC
Specificity: 0.022
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.926
25
Brain tissue (Mass)
Specificity: 0.556
25/56 (44.6%)
2
Liver tissue (Mass)
Specificity: 0.044
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.