Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P27659 | Rpl3 | Large ribosomal subunit protein uL3 … | Mus musculus (Mouse) | 403 aa |
Protein Details: P27659 (Rpl3)
Protein Information
| Accession | P27659 |
|---|---|
| Protein Names | Large ribosomal subunit protein uL3 (60S ribosomal protein L3) (J1 protein) |
| Gene Symbol | Rpl3 |
| Organism | Mus musculus (Mouse) |
| Length | 403 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSHRKFSAPR11HGSLGFLPRK21RSSRHRGKVK31SFPKDDASKP41VHLTAFLGYK
51-10051AGMTHIVREV61DRPGSKVNKK71EVVEAVTIVE81TPPMVVVGIV91GYVETPRGLR
101-150101TFKTVFAEHI111SDECKRRFYK121NWHKSKKKAF131TKYCKKWQDD141TGKKQLEKDF
151-200151NSMKKYCQVI161RIIAHTQMRL171LPLRQKKAHL181MEIQVNGGTV191AEKLDWARER
201-250201LEQQVPVNQV211FGQDEMIDVI221GVTKGKGYKG231VTSRWHTKKL241PRKTHRGLRK
251-300251VACIGAWHPA261RVAFSVARAG271QKGYHHRTEI281NKKIYKIGQG291YLIKDGKLIK
301-350301NNASTDYDLS311DKSINPLGGF321VHYGEVTNDF331IMLKGCVVGT341KKRVLTLRKS
351-400351LLVQTKRRAL361EKIDLKFIDT371TSKFGHGRFQ381TMEEKKAFMG391PLKKDRIAKE
401-403401EGA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 114 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L3 |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.44
|
| 134 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.41
|
|
| 157 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.72
|
|
| 253 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L3 |
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.97
|
| 336 | Ribosomal protein L3 |
MLE
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.261
6/6 (100.0%)
2
Brain
Specificity: 0.087
2/2 (100.0%)
2
Testis
Specificity: 0.087
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
13
Brain tissue (Mass)
Specificity: 0.565
13/56 (23.2%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.