Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P28652 | Camk2b | Calcium/calmodulin-dependent protein kinase type II … | Mus musculus (Mouse) | 542 aa |
Protein Details: P28652 (Camk2b)
Protein Information
| Accession | P28652 |
|---|---|
| Protein Names | Calcium/calmodulin-dependent protein kinase type II subunit beta (CaM kinase II subunit beta) (CaMK-II subunit beta) (EC 2.7.11.17) |
| Gene Symbol | Camk2b |
| Organism | Mus musculus (Mouse) |
| Length | 542 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATTVTCTRF11TDEYQLYEDI21GKGAFSVVRR31CVKLCTGHEY41AAKIINTKKL
51-10051SARDHQKLER61EARICRLLKH71SNIVRLHDSI81SEEGFHYLVF91DLVTGGELFE
101-150101DIVAREYYSE111ADASHCIQQI121LEAVLHCHQM131GVVHRDLKPE141NLLLASKCKG
151-200151AAVKLADFGL161AIEVQGDQQA171WFGFAGTPGY181LSPEVLRKEA191YGKPVDIWAC
201-250201GVILYILLVG211YPPFWDEDQH221KLYQQIKAGA231YDFPSPEWDT241VTPEAKNLIN
251-300251QMLTINPAKR261ITAHEALKHP271WVCQRSTVAS281MMHRQETVEC291LKKFNARRKL
301-350301KGAILTTMLA311TRNFSVGRQT321TAPATMSTAA331SGTTMGLVEQ341AKSLLNKKAD
351-400351GVKPQTNSTK361NSSAITSPKG371SLPPAALEPQ381TTVIHNPVDG391IKESSDSTNT
401-450401TIEDEDAKAR411KQEIIKTTEQ421LIEAVNNGDF431EAYAKICDPG441LTSFEPEALG
451-500451NLVEGMDFHR461FYFENLLAKN471SKPIHTTILN481PHVHVIGEDA491ACIAYIRLTQ
501-542501YIDGQGRPRT511SQSEETRVWH521RRDGKWQNVH531FHCSGAPVAP541LQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.02
|
|
| 31 | Protein kinase, ATP binding site Protein kinase domain Protein kinase-like domain superfamily Phosphorylase Kinase |
brain
(39008777)
|
Brain
(31311849)
|
GPS-Palm: 0.88
Deep-Palm: 0.62
|
|
| 35 | Protein kinase domain Protein kinase-like domain superfamily Phosphorylase Kinase |
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.90
Deep-Palm: 0.68
|
|
| 65 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.87
|
|
| 116 | - | - | - |
Deep-Palm: 0.08
|
|
| 127 | - | - | - |
Deep-Palm: 0.12
|
|
| 148 | Protein kinase domain |
Brain
(34200797)
|
Brain
(31311849)
|
GPS-Palm: 0.72
Deep-Palm: 0.97
|
|
| 200 | - | - | - |
Deep-Palm: 0.82
|
|
| 273 | - |
Brain
(34200797)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.67
Deep-Palm: 0.57
|
|
| 290 | - |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.80
Deep-Palm: 0.97
|
|
| 437 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.85
|
|
| 492 | Calcium/calmodulin dependent protein kinase II association domain |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.72
Deep-Palm: 0.49
|
|
| 533 | Calcium/calmodulin dependent protein kinase II association domain |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.65
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Brain
Specificity: 0.132
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
33
Brain tissue (Mass)
Specificity: 0.868
33/56 (58.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.