Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P31648 | Slc6a1; Gabt1; Gat-1; Gat1 | Sodium- and chloride-dependent GABA transporter … | Mus musculus (Mouse) | 599 aa |
Protein Details: P31648 (Slc6a1)
Protein Information
| Accession | P31648 |
|---|---|
| Protein Names | Sodium- and chloride-dependent GABA transporter 1 (GAT-1) (Solute carrier family 6 member 1) |
| Gene Symbol | Slc6a1; Gabt1; Gat-1; Gat1 |
| Organism | Mus musculus (Mouse) |
| Length | 599 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28680068 29733200 31772009 35358180 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
6
Brain tissue
Specificity: 0.667
6/12 (50.0%)
3
Neural Stem Cells
Specificity: 0.333
3/3 (100.0%)
0
Liver tissue
Specificity: 0.000
0/19 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MATDNSKVAD11GQISTEVSEA21PVASDKPKTL31VVKVQKKAGD41LPDRDTWKGR
51-10051FDFLMSCVGY61AIGLGNVWRF71PYLCGKNGGG81AFLIPYFLTL91IFAGVPLFLL
101-150101ECSLGQYTSI111GGLGVWKLAP121MFKGVGLAAA131VLSFWLNIYY141IVIISWAIYY
151-200151LYNSFTTTLP161WKQCDNPWNT171DRCFSNYSLV181NTTNMTSAVV191EFWERNMHQM
201-250201TDGLDKPGQI211RWPLAITLAI221AWVLVYFCIW231KGVGWTGKVV241YFSATYPYIM
251-300251LIILFFRGVT261LPGAKEGILF271YITPNFRKLS281DSEVWLDAAT291QIFFSYGLGL
301-350301GSLIALGSYN311SFHNNVYRDS321IIVCCINSCT331SMFAGFVIFS341IVGFMAHVTK
351-400351RSIADVAASG361PGLAFLAYPE371AVTQLPISPL381WAILFFSMLL391MLGIDSQFCT
401-450401VEGFITALVD411EYPRLLRNRR421ELFIAAVCIV431SYLIGLSNIT441QGGIYVFKLF
451-500451DYYSASGMSL461LFLVFFECVS471ISWFYGVNRF481YDNIQEMVGS491RPCIWWKLCW
501-550501SFFTPIIVAG511VFLFSAVQMT521PLTMGSYVFP531KWGQGVGWLM541ALSSMVLIPG
551-599551YMAYMFLTLK561GSLKQRLQVM571IQPSEDIVRP581ENGPEQPQAG591SSASKEAYI
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 57 | Prediction (Medium) | - | - |
| 74 | Experimental Prediction (Medium) | Sodium:neurotransmitter symporter family | 35358180 |
| 164 | Experimental CYSMODDB SWISSPALM DBPTM | Sodium:neurotransmitter symporter family | 28680068 |
| 173 | Experimental | Sodium:neurotransmitter symporter family | 28680068 |
| 228 | Prediction (Medium) | - | - |
| 324 | Prediction (Medium) | - | - |
| 325 | Prediction (Low) | - | - |
| 399 | Prediction (Low) | - | - |
| 428 | Prediction (Medium) | - | - |
| 493 | Experimental CYSMODDB SWISSPALM DBPTM | Sodium:neurotransmitter symporter family | 28680068 |
| 499 | Experimental | Sodium:neurotransmitter symporter family | 28680068 |