Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P31649 | Slc6a13; Gabt2; Gabt3; Gat-3; Gat2; Gat3 | Sodium- and chloride-dependent GABA transporter … | Mus musculus (Mouse) | 602 aa |
Protein Details: P31649 (Slc6a13)
Protein Information
| Accession | P31649 |
|---|---|
| Protein Names | Sodium- and chloride-dependent GABA transporter 2 (GAT-2) (Sodium- and chloride-dependent GABA transporter 3) (GAT-3) (Solute carrier family 6 member 13) |
| Gene Symbol | Slc6a13; Gabt2; Gabt3; Gat-3; Gat2; Gat3 |
| Organism | Mus musculus (Mouse) |
| Length | 602 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.760
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.760
19/19 (100.0%)
3
Brain tissue
Specificity: 0.120
3/12 (25.0%)
3
Liver membrane
Specificity: 0.120
3/6 (50.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MENRASGTTS11NGETKPVCPA21MEKVEEDGTL31EREHWNNKME41FVLSVAGEII
51-10051GLGNVWRFPY61LCYKNGGGAF71FIPYLIFLFT81CGIPVFFLET91ALGQYTNQGG
101-150101ITAWRRICPI111FEGIGYASQM121IVSLLNVYYI131VVLAWALFYL141FSSFTTDLPW
151-200151GSCSHEWNTE161NCVEFQKAND171SMNVTSENAT181SPVIEFWERR191VLKLSDGIQH
201-250201LGSLRWELVL211CLLLAWIICY221FCIWKGVKST231GKVVYFTATF241PYLMLVVLLI
251-300251RGVTLPGAAQ261GIQFYLYPNI271TRLWDPQVWM281DAGTQIFFSF291AICLGCLTAL
301-350301GSYNKYHNNC311YRDCIALCIL321NSSTSFMAGF331AIFSILGFMS341QEQGVPISEV
351-400351AESGPGLAFI361AYPRAVVMLP371FSPLWACCFF381FMVVLLGLDS391QFVCVESLVT
401-450401ALVDMYPRVF411RKKNRREVLI421LIVSVISFFI431GLIMLTEGGM441YVFQLFDYYA
451-500451ASGMCLLFVA461IFESLCVAWV471YGAGRFYDNI481EDMIGYKPWP491LIKYCWLFFT
501-550501PAVCLATFLF511SLIKYTPLTY521NKKYTYPWWG531DALGWLLALS541SMICIPAWSI
551-600551YKLRTLKGPL561RERLRQLVCP571AEDLPQKNQP581EPTAPATPMT591SLLRLTELES
601-602601NC
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 62 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | Sodium:neurotransmitter symporter family | 28526873 |
| 108 | Prediction (High) | - | - |
| 219 | Prediction (High) | - | - |
| 222 | Prediction (Medium) | - | - |
| 293 | Prediction (Low) | - | - |
| 296 | Prediction (Medium) | - | - |
| 466 | Prediction (Medium) | - | - |
| 495 | Prediction (Low) | - | - |
| 544 | Prediction (High) | - | - |
| 569 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28526873 |
| 602 | Prediction (High) | - | - |