Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P33897 | ABCD1 | ATP-binding cassette sub-family D member … | Homo sapiens (Human) | 745 aa |
Protein Details: P33897 (ABCD1)
Protein Information
| Accession | P33897 |
|---|---|
| Protein Names | ATP-binding cassette sub-family D member 1 (EC 3.1.2.-) (EC 7.6.2.-) (Adrenoleukodystrophy protein) (ALDP) |
| Gene Symbol | ABCD1 |
| Organism | Homo sapiens (Human) |
| Length | 745 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPVLSRPRPW11RGNTLKRTAV21LLALAAYGAH31KVYPLVRQCL41APARGLQAPA
51-10051GEPTQEASGV61AAAKAGMNRV71FLQRLLWLLR81LLFPRVLCRE91TGLLALHSAA
101-150101LVSRTFLSVY111VARLDGRLAR121CIVRKDPRAF131GWQLLQWLLI141ALPATFVNSA
151-200151IRYLEGQLAL161SFRSRLVAHA171YRLYFSQQTY181YRVSNMDGRL191RNPDQSLTED
201-250201VVAFAASVAH211LYSNLTKPLL221DVAVTSYTLL231RAARSRGAGT241AWPSAIAGLV
251-300251VFLTANVLRA261FSPKFGELVA271EEARRKGELR281YMHSRVVANS291EEIAFYGGHE
301-350301VELALLQRSY311QDLASQINLI321LLERLWYVML331EQFLMKYVWS341ASGLLMVAVP
351-400351IITATGYSES361DAEAVKKAAL371EKKEEELVSE381RTEAFTIARN391LLTAAADAIE
401-450401RIMSSYKEVT411ELAGYTARVH421EMFQVFEDVQ431RCHFKRPREL441EDAQAGSGTI
451-500451GRSGVRVEGP461LKIRGQVVDV471EQGIICENIP481IVTPSGEVVV491ASLNIRVEEG
501-550501MHLLITGPNG511CGKSSLFRIL521GGLWPTYGGV531LYKPPPQRMF541YIPQRPYMSV
551-600551GSLRDQVIYP561DSVEDMQRKG571YSEQDLEAIL581DVVHLHHILQ591REGGWEAMCD
601-650601WKDVLSGGEK611QRIGMARMFY621HRPKYALLDE631CTSAVSIDVE641GKIFQAAKDA
651-700651GIALLSITHR661PSLWKYHTHL671LQFDGEGGWK681FEKLDSAARL691SLTEEKQRLE
701-745701QQLAGIPKMQ711RRLQELCQIL721GEAVAPAHVP731APSPQGPGGL741QGAST
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 39 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.98
|
|
| 88 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.99
|
|
| 121 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.96
|
|
| 432 | - | - | - |
Deep-Palm: 0.72
|
|
| 476 | - | - | - |
Deep-Palm: 0.92
|
|
| 511 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.95
|
|
| 599 | - | - | - |
Deep-Palm: 0.76
|
|
| 631 | - | - | - |
Deep-Palm: 0.96
|
|
| 717 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
LNCaP
Specificity: 0.750
3/3 (100.0%)
1
U937 cell
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.