Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35282 | Rab21 | Ras-related protein Rab-21 (EC 3.6.5.2) … | Mus musculus (Mouse) | 222 aa |
Protein Details: P35282 (Rab21)
Protein Information
| Accession | P35282 |
|---|---|
| Protein Names | Ras-related protein Rab-21 (EC 3.6.5.2) (Rab-12) |
| Gene Symbol | Rab21 |
| Organism | Mus musculus (Mouse) |
| Length | 222 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAGGGAAA11AAGRAYSFKV21VLLGEGCVGK31TSLVLRYCEN41KFNDKHITTL
51-10051QASFLTKKLN61IGGKRVNLAI71WDTAGQERFH81ALGPIYYRDS91NGAILVYDVT
101-150101DEDSFQKVKN111WVKELRKMLG121NEICLCIVGN131KIDLEKERHV141SIQEAESYAE
151-200151SVGAKHYHTS161AKQNKGIEEL171FLDLCKRMIE181TAQVDERAKG191NGSSQAGAAR
201-222201RGVQIIDDEP211QAQSSGGCCS221SG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 27 | P-loop containing nucleoside triphosphate hydrolase Ras of Complex, Roc, domain of DAPkinase Transforming protein P21 ras signature | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 38 | Transforming protein P21 ras signature P-loop containing nucleoside triphosphate hydrolase Ras of Complex, Roc, domain of DAPkinase small GTPase Rab1 family profile. | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 124 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.95
|
|
| 126 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.95
|
|
| 175 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.94
|
| 218 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.02
|
|
| 219 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Brain
Specificity: 0.125
3/3 (100.0%)
2
Liver
Specificity: 0.083
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.792
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.