Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35293 | Rab18 | Ras-related protein Rab-18 (EC 3.6.5.2) | Mus musculus (Mouse) | 206 aa |
Protein Details: P35293 (Rab18)
Protein Information
| Accession | P35293 |
|---|---|
| Protein Names | Ras-related protein Rab-18 (EC 3.6.5.2) |
| Gene Symbol | Rab18 |
| Organism | Mus musculus (Mouse) |
| Length | 206 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDEDVLTTLK11ILIIGESGVG21KSSLLLRFTD31DTFDPELAAT41IGVDFKVKTI
51-10051SVDGNKAKLA61IWDTAGQERF71RTLTPSYYRG81AQGVILVYDV91TRRDTFVKLD
101-150101NWLNELETYC111TRNDIVNMLV121GNKIDKENRE131VDRNEGLKFA141RKHSMLFIEA
151-200151SAKTCDGVQC161AFEELVEKII171QTPGLWESEN181QNKGVKLSHR191EESRGGGACG
201-206201GYCSVL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 110 | SWISSPALM DBPTM CYSMODDB | Ras family |
Liver
(28526873)
| - |
Deep-Palm: 0.77
|
| 155 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 160 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 199 | - | - | - |
Deep-Palm: 0.07
|
|
| 203 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.429
6/6 (100.0%)
2
Brain
Specificity: 0.143
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.429
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.