Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35436 | Grin2a | Glutamate receptor ionotropic, NMDA 2A … | Mus musculus (Mouse) | 1464 aa |
Protein Details: P35436 (Grin2a)
Protein Information
| Accession | P35436 |
|---|---|
| Protein Names | Glutamate receptor ionotropic, NMDA 2A (GluN2A) (Glutamate [NMDA] receptor subunit epsilon-1) (N-methyl D-aspartate receptor subtype 2A) (NMDAR2A) (NR2A) |
| Gene Symbol | Grin2a |
| Organism | Mus musculus (Mouse) |
| Length | 1464 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGRLGYWTLL11VLPALLVWHG21PAQNAAAEKG31TPALNIAVLL41GHSHDVTERE
51-10051LRNLWGPEQA61TGLPLDVNVV71ALLMNRTDPK81SLITHVCDLM91SGARIHGLVF
101-150101GDDTDQEAVA111QMLDFISSQT121FIPILGIHGG131ASMIMADKDP141TSTFFQFGAS
151-200151IQQQATVMLK161IMQDYDWHVF171SLVTTIFPGY181RDFISFIKTT191VDNSFVGWDM
201-250201QNVITLDTSF211EDAKTQVQLK221KIHSSVILLY231CSKDEAVLIL241SEARSLGLTG
251-300251YDFFWIVPSL261VSGNTELIPK271EFPSGLISVS281YDDWDYSLEA291RVRDGLGILT
301-350301TAASSMLEKF311SYIPEAKASC321YGQTEKPETP331LHTLHQFMVN341VTWDGKDLSF
351-400351TEEGYQVHPR361LVVIVLNKDR371EWEKVGKWEN381QTLSLRHAVW391PRYKSFSDCE
401-450401PDDNHLSIVT411LEEAPFVIVE421DIDPLTETCV431RNTVPCRKFV441KINNSTNEGM
451-500451NVKKCCKGFC461IDILKKLSRT471VKFTYDLYLV481TNGKHGKKVN491NVWNGMIGEV
501-550501VYQRAVMAVG511SLTINEERSE521VVDFSVPFVE531TGISVMVSRS541NGTVSPSAFL
551-600551EPFSASVWVM561MFVMLLIVSA571IAVFVFEYFS581PVGYNRNLAK591GKAPHGPSFT
601-650601IGKAIWLLWG611LVFNNSVPVQ621NPKGTTSKIM631VSVWAFFAVI641FLASYTANLA
651-700651AFMIQEEFVD661QVTGLSDKKF671QRPHDYSPPF681RFGTVPNGST691ERNIRNNYPY
701-750701MHQYMTKFNQ711RGVEDALVSL721KTGKLDAFIY731DAAVLNYKAG741RDEGCKLVTI
751-800751GSGYIFATTG761YGIALQKGSP771WKRQIDLALL781QFVGDGEMEE791LETLWLTGIC
801-850801HNEKNEVMSS811QLDIDNMAGV821FYMLAAAMAL831SLITFIWEHL841FYWKLRFCFT
851-900851GVCSDRPGLL861FSISRGIYSC871IHGVHIEEKK881KSPDFNLTGS891QSNMLKLLRS
901-950901AKNISNMSNM911NSSRMDSPKR921AADFIQRGSL931IVDMVSDKGN941LIYSDNRSFQ
951-1000951GKDSIFGENM961NELQTFVANR971HKDSLSNYVF981QGQHPLTLNE991SNPNTVEVAV
1001-10501001STESKGNSRP1011RQLWKKSMES1021LRQDSLNQNP1031VSQRDEKTAE1041NRTHSLKSPR
1051-11001051YLPEEVAHSD1061ISETSSRATC1071HREPDNNKNH1081KTKDNFKRSM1091ASKYPKDCSE
1101-11501101VERTYVKTKA1111SSPRDKIYTI1121DGEKEPSFHL1131DPPQFIENIV1141LPENVDFPDT
1151-12001151YQDHNENFRK1161GDSTLPMNRN1171PLHNEDGLPN1181NDQYKLYAKH1191FTLKDKGSPH
1201-12501201SEGSDRYRQN1211STHCRSCLSN1221LPTYSGHFTM1231RSPFKCDACL1241RMGNLYDIDE
1251-13001251DQMLQETGNP1261ATREEAYQQD1271WSQNNALQFQ1281KNKLKINRQH1291SYDNILDKPR
1301-13501301EIDLSRPSRS1311ISLKDRERLL1321EGNLYGSLFS1331VPSSKLLGNK1341SSLFPQGLED
1351-14001351SKRSKSLLPD1361HTSDNPFLHT1371YGDDQRLVIG1381RCPSDPYKHS1391LPSQAVNDSY
1401-14501401LRSSLRSTAS1411YCSRDSRGHS1421DVYISEHVMP1431YAANKNNMYS1441TPRVLNSCSN
1451-14641451RRVYKKMPSI1461ESDV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 87 | - | - | - |
Deep-Palm: 0.77
|
|
| 231 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.96
|
|
| 320 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.73
|
|
| 399 | - | - | - |
Deep-Palm: 0.68
|
|
| 429 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.52
|
|
| 436 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.17
|
|
| 455 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.32
|
|
| 456 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.37
|
|
| 460 | Ligated ion channel L-glutamate- and glycine-binding site |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.33
|
|
| 745 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.92
|
|
| 800 | - | - | - |
Deep-Palm: 0.41
|
|
| 848 | - | - |
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.46
|
|
| 853 | N-methyl D-aspartate receptor 2B3 C-terminus |
Brain
(31311849)
|
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.78
|
|
| 870 | SWISSPALM DBPTM CYSMODDB | N-methyl D-aspartate receptor 2B3 C-terminus |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(31311849)
|
GPS-Palm: 0.90
Deep-Palm: 0.92
|
| 1070 | - | - | - |
Deep-Palm: 0.14
|
|
| 1098 | - | - | - |
Deep-Palm: 0.64
|
|
| 1214 | - | - | - |
Deep-Palm: 0.15
|
|
| 1217 | - | - | - |
Deep-Palm: 0.17
|
|
| 1236 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.15
|
|
| 1239 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.15
|
|
| 1382 | - | - | - |
Deep-Palm: 0.49
|
|
| 1412 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.77
|
|
| 1448 | N-methyl D-aspartate receptor 2B3 C-terminus |
brain
(39008777)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.26
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Brain
Specificity: 0.357
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.643
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.